New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1260043 =	56 (0.820)	4 (0.060)	4/320	NT	7.0%	coding (1408/2451 nt)	PP_1103	ATP‑dependent helicase, DEAD box family
	?	AE015451	1260090 =	53 (0.820)					coding (1361/2451 nt)	PP_1103	ATP‑dependent helicase, DEAD box family

CATGTTTTCCACGCGTACCAGCTCTAGTACCCGCCCGGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGAAAAGCGGGCTTCGATG  >  AE015451/1259858‑1260311                                                                                                                                                                                                                                         |                                                                                                                                                                                                                              cATGTTTTCCACGCGTACCAGCTCTAGTACCCGCCCGGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCg                                                                                                                                                                                                                             <  1:1011853/235‑1 (MQ=255)  aTGTTTTCCACGCGTACCAGCTCTAGTACCCGCCCGGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTc                                                                                                                                                                                                                              >  2:1107753/1‑233 (MQ=255)             gcgTACCAGCTCTAGTACCCGCCCGGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCCGCCTGGCCCt                                                                                                                                                                                                                               >  2:833968/1‑221 (MQ=255)                    aGCTCTAGTACCCGCCCGGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTa                                                                                                                                                                                                         <  1:921925/236‑1 (MQ=255)                              cccgcccgGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAAt                                                                                                                                                                                               >  1:1162471/1‑236 (MQ=255)                              cccgcccgGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAAt                                                                                                                                                                                               >  1:1240498/1‑236 (MQ=255)                              cccgcccgGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCACTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCa                                                                                                                                                                                                 >  2:679756/1‑234 (MQ=255)                                              cAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTgg                                                                                                                                                                                <  1:396301/235‑1 (MQ=255)                                                         cGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTc                                                                                                                                                                     >  1:698126/1‑235 (MQ=255)                                                             ctcgccgaagtgcgcagcacctgggcttttcgccagttgcgcgacagccaatggcaatgggcgctggacttcgtctgccacggcggcagctcattgaccgcctacccggactaccagcgtgtcgagcgccaggccgacggagtttaccgggttaccagcgaacgcctggcgcTCGacac                                                                                                                                                                                                                         <  2:1268745‑M2/7‑1 (MQ=255)                                                              cgcAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGCAGt                                                                                                                                                                      >  2:994088/1‑229 (MQ=255)                                                              cgcAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCACCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCa                                                                                                                                                                   >  1:693897/1‑232 (MQ=255)                                                                      ggcgATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGGTGACGCCGTGGCAGACGAAg                                                                                                                                                                       >  2:462750/1‑220 (MQ=255)                                                                              agacagcttcAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTCTTTCAGTTGCAGGTTGGCATCGCTGACGATGCTGCCGATGCCCATGCGGTGGTGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCACTGCCATTGGCTg                                                                                                                                               <  1:1210837/230‑1 (MQ=255)                                                                                   tcttcAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTcgcg                                                                                                                                          <  1:637879/236‑1 (MQ=255)                                                                                    cttcAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTcg                                                                                                                                            >  2:1162102/1‑233 (MQ=255)                                                                                         acacTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTc                                                                                                                                                                     <  2:470006/203‑1 (MQ=255)                                                                                                  aGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGt                                                                                                                                                                                                          >  2:372864/1‑157 (MQ=255)                                                                                                  aGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGc                                                                                                                           >  1:940179/1‑236 (MQ=255)                                                                                                  aGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCACGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCACCCATTGCCATCGGCTGTCGCGCAACTGGCgctg                                                                                                                              >  2:1210834/1‑230 (MQ=255)                                                                                                       tttCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAGTGAGCTGCCGCCGTGGCAGa                                                                                                                                                                            >  2:1251939/1‑182 (MQ=255)                                                                                                        ttCCCGCCGCCGGCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAATCTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAg                                                                                                                       <  1:663539/234‑1 (MQ=255)                                                                                                         tCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTg                                                                                                                                    <  1:476224/220‑1 (MQ=255)                                                                                                                          cTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAg                                                                                                   <  1:570939/236‑1 (MQ=255)                                                                                                                               gacttcgtctgccacggcggcagctcattgaccgcctacccggactaccagcgtgtcgaGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTCGTCCGGGTAGGCGGGCAATGAGCggccgccgcg                                                                                                                                                                                 <  1:426003‑M1/94‑3 (MQ=255)                                                                                                                                  tttCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGt                                                                                                                     <  2:938028/210‑1 (MQ=255)                                                                                                                                  tttCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTg                                                                                             >  2:659356/1‑234 (MQ=255)                                                                                                                                     cAGTTGCAGGTTGGCAGCGCTGACGGTGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCg                                                                                                                                                                                                                             <  2:215789/103‑1 (MQ=255)                                                                                                                                           cgcggcggccgctcattgcccgcctacccggacgaccagcgtgtcgagcgccaggccgacggagtttaccgggttaccagcgaacgcctggcgcTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTc                                                                                                                                                                     <  1:426003‑M2/59‑1 (MQ=255)                                                                                                                                            acggcggcagctcattgaccgcctacccggactaccagcgtgtcgaGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGc                                                                                                                                                                                                                       <  1:1195084‑M1/56‑1 (MQ=255)                                                                                                                                             ggTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGCCACGCCGGTAGTCCgg                                                                                                                                                                                                            >  2:383657/1‑112 (MQ=255)                                                                                                                                             ggTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCt                                                                                           >  2:918689/1‑225 (MQ=255)                                                                                                                                             ggTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGaaaa                                                                                <  1:1162105/236‑1 (MQ=255)                                                                                                                                               ttGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGaaaa                                                                                <  2:698123/234‑1 (MQ=255)                                                                                                                                                tGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCAGGGCGaa                                                                                  >  1:92180/1‑231 (MQ=255)                                                                                                                                                           aCGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCccattgccatt                                                                                                                                                    <  2:687227/154‑1 (MQ=255)                                                                                                                                                                    ccGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCt                                                                           <  2:805781/218‑1 (MQ=255)                                                                                                                                                                    ccGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGa                                                          <  1:663170/235‑1 (MQ=255)                                                                                                                                                                      gATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGAcc                                                        >  1:1118127/1‑235 (MQ=255)                                                                                                                                                                        tGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGGGCAGTTGCTcc                                                                                         >  1:17073/1‑200 (MQ=255)                                                                                                                                                                        tGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAg                                                      >  1:1010823/1‑235 (MQ=255)                                                                                                                                                                         gCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCg                                                                                                                                 <  1:215414/159‑1 (MQ=255)                                                                                                                                                                         gCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGcc                                                                 <  2:897507/223‑1 (MQ=255)                                                                                                                                                                                 gcgtgtcgagcgccaggccgacggagtttaccgggttaccagcgaacgcctggcgcTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGt                                                                                                                                                                                  <  1:1195084‑M2/46‑1 (MQ=255)                                                                                                                                                                                  gTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTTGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCa                                           <  1:632344/236‑1 (MQ=255)                                                                                                                                                                                  gTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCa                                           <  1:1227879/236‑1 (MQ=255)                                                                                                                                                                                  gTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCa                                           <  1:918692/236‑1 (MQ=255)                                                                                                                                                                                   tGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAgcgc                                                                                                                                                               <  1:714187/119‑1 (MQ=255)                                                                                                                                                                                   gtgtcgaGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAg                                                                                                   <  2:1268745‑M1/172‑1 (MQ=255)                                                                                                                                                                                     gcgccgcgccAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCa                                        <  1:750982/236‑1 (MQ=255)                                                                                                                                                                                        ccgcgccAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGt                                     >  1:1159756/1‑236 (MQ=255)                                                                                                                                                                                         cgcgccAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAg                                                      <  2:445818/218‑1 (MQ=255)                                                                                                                                                                                           CGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGtgct                                                                                                                  >  2:123200‑M1/1‑156 (MQ=255)                                                                                                                                                                                               atGCGTTCGCTGGTAACCCGGTCAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCTTGCTGACCAGATGCTGTAc                                             >  1:1186356‑M1/3‑221 (MQ=255)                                                                                                                                                                                                GGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGaaa                                                                                                                              <  2:1098708‑M1/139‑1 (MQ=255)                                                                                                                                                                                                     gcGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCa                                        <  2:1173006/219‑1 (MQ=255)                                                                                                                                                                                                     acggagtttaccgggttaccagcgaacgcctggcgcTCGACACGCTGGTAGTCCGGGTa                                                                                                                                                                                                         <  2:648271‑M2/23‑1 (MQ=255)                                                                                                                                                                                                           ggaaCCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCa                                        <  2:1201222/212‑1 (MQ=255)                                                                                                                                                                                                            tcaCCCGGTAAGCTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAg                                                      <  2:793116/197‑1 (MQ=255)                                                                                                                                                                                                            tAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGaa                 <  1:1130326/236‑1 (MQ=255)                                                                                                                                                                                                             caCCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGaaa                <  2:741991/235‑1 (MQ=255)                                                                                                                                                                                                                ccGGGAAGCTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCg                                                                                                                                 <  2:267905/120‑1 (MQ=255)                                                                                                                                                                                                                    gaaaCTCCGCCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGc                                                                                     <  2:931408/159‑1 (MQ=255)                                                                                                                                                                                                                      aaCTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAg                                                                                                                                                                             >  1:132464/1‑70 (MQ=255)                                                                                                                                                                                                                      aaCTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAg                                                                                                                                                                             <  2:132464/70‑1 (MQ=255)                                                                                                                                                                                                                      aaCTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAg                                                      <  1:666079/189‑1 (MQ=255)                                                                                                                                                                                                                       aCTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTg                                                           <  2:589797/183‑1 (MQ=255)                                                                                                                                                                                                                           cGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCTTGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGAAAAGCGGGCTTCGAtg  <  1:679759/236‑1 (MQ=255)                                                                                                                                                                                                                           cGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGAAAAGCGGGCTTCGAtg  <  1:807702/236‑1 (MQ=255)                                                                                                                                                                                                                             tCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGGCCAGCGCCCATTGCCATTGGCTGTCgcgc                                                                                                                                         >  2:374717/1‑99 (MQ=255)                                                                                                                                                                                                                              cGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCa                                                       >  1:91315/1‑180 (MQ=255)                                                                                                                                                                                                                                     gcgcTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTAAAAAGCGGGCTTCGAtg  <  2:787364‑M2/222‑1 (MQ=255)                                                                                                                                                                                                                                        cTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCa                                                                      <  1:608632‑M2/154‑1 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                              CATGTTTTCCACGCGTACCAGCTCTAGTACCCGCCCGGCAAACACCAGGGTATCGCCGGGGCGCAGGCGGGCGATGAACGCTTCTTCAACACTGCCCAGCGTTTTCCCGCCGCCGCCCTTGCTCCAGTATTTCAGTTGCAGGTTGGCATCGCTGACGATGGTGCCGATGCCCATGCGGTGGCGCCGCGCCAGGCGTTCGCTGGTAACCCGGTAAACTCCGTCGGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGAAAAGCGGGCTTCGATG  >  AE015451/1259858‑1260311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.