| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 4383136 = | 108 (1.570) | 5 (0.080) | 5/322 | NT | 5.0% | coding (719/804 nt) | PP_3858 | putative Tail fiber protein |
| ? | AE015451 | 4383173 = | 88 (1.350) | coding (682/804 nt) | PP_3858 | putative Tail fiber protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGAGACTGAAAGTCGCCTGAGCACCAAGCAAGATCTCAATACGGCGGGGTTCGGCAGCTCGGCGTCGTGGGAGCGCGATGGCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4383376‑4383136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatcctCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGTCTGCTCATTGGGGCCTGCCGCCATGTTGAACACACCGTACTGTTGGACTGCGCCGGTTGAGCCATCGCGCTCCCACGACGCCGAGCTGCCGAACCCCGCCGTATTGAGATCTTGCTTGGTGCTCAGGCGACTTTCAGTCTCGACCTTGGTATAGGTCTCTGCTCGACTGTACG > AE015451/4383173‑4383406 TCGAGACTGAAAGTCGCCTGAGCACCAAGCAAGATCTCAATACGGCGGGGTTCGGCAGCTCGGCGTCGTGGGAGCGCGATGGCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACT‑TCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGC > 1:692714/1‑235 TCGCCTGAGCACCAAGCAAGATCTCAATACGGCGGGGTTCGGCAGCTCGGCGTCGTGGGAGCGCGATGGCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATCCT < 2:465579/228‑1 TGAGCACCAAGCAAGATCTCAATACGGCGGGGTTCGGCAGCTCGGCGTCGTGGGAGCGCGATGGCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATC > 1:58983/1‑221 gcGGTTCGGCAGCTCGGCGTCGTGGGAGCGCGATGGCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATCCTCCAGGTTGGTCAGCCCCACATACCT < 2:1153281/218‑1 GGGGTTCGGCAGCTCGGCGTCGTGGGAGCGCGATGGCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCCATACTGTGCGCATCCTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAct > 1:1153284/1‑234 GCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATCCTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTC < 2:1212437/204‑1 TGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCG > 2:161386/1‑126 CAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATCCTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGTCTGCTCAT < 2:855321/170‑1 CCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATCCTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGT < 1:345637/147‑1 gcgTCCTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGTCTGCTCATTGGGGCCTGCCGCCATGTTGAACACACCGTACTGTTGGACTGCGCCGGTTGAGCCATCGCGCTCCCACGACGCCGAGCTGCCGAACCCCGCCGTATTGAGATCTTGCTTGGTGCTCAGGCGACTTTCAGTCTC < 1:1212440/206‑1 CTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGTCTGCTCATTGGGGCCTGCCGCCATGTTGAACACACCGTACTGTTGGACTGCGCCGGTTGAGCCATCGCGCTCCCACGACGCCGAGCTGCCGAACCCCGCCGTATTGAGATCTTGCTTGGTGCTCAGGCGACTTTCAGTCTCGACCTTGGTATAGGTCTCTGCTCGACTGTACG < 1:673143/236‑1 CTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGTCTGCTCATTGGGGCCTGCCGCCATGTTGAACACACCGTACTGTTGGACTGCGCCGGTTGAGCCATCGCGCTCCCACGACGCCGAGCTGCCGAACCCCGCCGTATTGAGATCTTGCTTGGTGCTCAGGCGACTTTCAGTCTCGACCTTG < 1:792172/211‑1 CTCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGTCTGCTCATTGGGGCCTGCCGCCATGTTGAACACACCGTACTGTTGGACTGCGCCGGTTGAGCCATCGCGCTCCCACGACGCCGAGCTGCCGAACCCCGCCGTATTGAGATCTTGCTTGGTGCTCA < 2:713506/188‑1 TCGAGACTGAAAGTCGCCTGAGCACCAAGCAAGATCTCAATACGGCGGGGTTCGGCAGCTCGGCGTCGTGGGAGCGCGATGGCTCAACCGGCGCAGTCCAACAGTACGGTGTGTTCAACATGGCGGCAGGCCCCAATGAGCAGACTATCCCCTTCCCGGTGAGCTTTCCTACCGCATGCAGGTATGTGGGGCTGACCAACCTGGAGGATGCGGCGGCCGAGGGCAATACTGTGCGCATCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4383376‑4383136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatcctCCAGGTTGGTCAGCCCCACATACCTGCATGCGGTAGGAAAGCTCACCGGGAAGGGGATAGTCTGCTCATTGGGGCCTGCCGCCATGTTGAACACACCGTACTGTTGGACTGCGCCGGTTGAGCCATCGCGCTCCCACGACGCCGAGCTGCCGAACCCCGCCGTATTGAGATCTTGCTTGGTGCTCAGGCGACTTTCAGTCTCGACCTTGGTATAGGTCTCTGCTCGACTGTACG > AE015451/4383173‑4383406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |