| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5441955 = | 61 (0.890) | 3 (0.050) | 3/322 | NT | 5.3% | coding (629/1653 nt) | PP_4780 | putative Acyl‑CoA dehydrogenase |
| ? | AE015451 | 5441989 = | 49 (0.750) | coding (595/1653 nt) | PP_4780 | putative Acyl‑CoA dehydrogenase | |||||
GCCGGCACCGGCTGCCCGCTGACCATGACGTTTGCCGCCGTGCCGGCATTGCGCCTGCAGCCTGAGCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5442193‑5441955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGCCTCGGCCTGGCTGTGCAGGTAGGTCAT > AE015451/5441989‑5442220 GCCGGCACCGGCTGCCCGCTGACCATGACGTTTGCCGCCGTGCCGGCATTGCGCCTGCAGCCTGAGCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCC < 1:1148523/236‑1 CGGCACCGGCTGCCCGCTGACCATGACGTTTGCCGCCGTGCCGGCATTGCGCCTGCAGCCTGAGCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCG < 1:893096/235‑1 GGCACCGGCTGCCCGCTGACCATGACGTTTGCCGCCGTGCCGGCATTGCGCCTGCAGCCTGAGCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGG > 1:322177/1‑236 CGTTTGCCGCCGTGCCGGCATTGCGCCTGCAGCCTGAGCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGG < 1:361138/211‑1 GCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGG > 2:980363/1‑174 GCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGG < 1:980366/174‑1 ATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGG < 1:1123075/165‑1 CACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCC < 1:1195479/104‑1 CACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCC > 2:1195476/1‑104 AAGGCCGGGGTCACCCTCGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATG < 2:926791/148‑1 ATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCG < 1:499537/75‑1 ATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCG > 2:499534/1‑75 TATCCGGTCGGTGCGCCGGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGA < 1:777695/86‑1 TATCCGGTCGGTGCGCCGGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGA > 2:777692/1‑86 CCGGGTAGTGTTGGCGCGCGCACCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGA < 2:22143/65‑1 CGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGCattgcg < 2:470660/215‑7 CGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGCCTCGGCCTGGCTGTGCAGGTAGGTCAT < 1:614791/236‑1 GGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAa > 2:1071373/1‑141 GCCGGCACCGGCTGCCCGCTGACCATGACGTTTGCCGCCGTGCCGGCATTGCGCCTGCAGCCTGAGCTGGCTGAATACTGGCTGCCGAAAATCCTTGCCTGCGAATATGACCCGCGCAACGTTGGCGACCGGCACAAGGCCGGGGTCACCCTGGGCATGGCCATGACCGAAAAACAGGGCGGCACCGATGTGCGCGCCAACACTACCCGGGCCTATCCGGTCGGTGCGCCGGGCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5442193‑5441955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGCCTCGGCCTGGCTGTGCAGGTAGGTCAT > AE015451/5441989‑5442220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |