New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5441955 =	61 (0.890)	3 (0.050)	3/322	NT	5.3%	coding (629/1653 nt)	PP_4780	putative Acyl‑CoA dehydrogenase
	?	AE015451	5441989 =	49 (0.750)					coding (595/1653 nt)	PP_4780	putative Acyl‑CoA dehydrogenase

TGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGCCTCGGCCTGGCTGTGCAGGTAGGTCAT  >  AE015451/5441782‑5442220                                                                                                                                                                                                                |                                                                                                                                                                                                                                        tGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTgccgcc                                                                                                                                                                                                              >  1:1015244/1‑235 (MQ=255)        cTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGgcgcgc                                                                                                                                                                                                                            >  1:992160/1‑214 (MQ=255)          tGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGt                                                                                                                                                                                                                                         >  2:1069502/1‑199 (MQ=255)                tcAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCAt                                                                                                                                                                                               <  1:755205/235‑1 (MQ=255)                    gcgcTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTc                                                                                                                                                                                                 >  1:1242611/1‑229 (MQ=255)                     cgcTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCAt                                                                                                                                                                                         >  1:817459/1‑236 (MQ=255)                      gcTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCa                                                                                                                                                                                          <  2:559634/234‑1 (MQ=255)                         ggATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGTACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGGAGTGTTGGCGCGCACATCGGt                                                                                                                                                                                                                    >  1:69967/1‑205 (MQ=255)                           atatAGAACTGGTTGCGGTTGGCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAg                                                                                                                                                                                   <  1:1132288/236‑1 (MQ=255)                            tataGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTgccgc                                                                                                                                                                                                               <  1:291586/207‑1 (MQ=255)                            tataGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAgg                                                                                                                                                                                  >  1:789257/1‑236 (MQ=255)                                 aaCTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              <  1:23078/235‑1 (MQ=255)                                    tGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGca                                                                                                                                                                                                                           <  1:1278581/187‑1 (MQ=255)                                       ttGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGca                                                                                                                                                                                                                           >  1:78944/1‑184 (MQ=255)                                       ttGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCa                                                                                                                                                                                                >  1:1059017/1‑211 (MQ=255)                                       ttGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCCTGGCCATGCCCAGGGTGACCCCGGc                                                                                                                                                                       >  1:749254/1‑236 (MQ=255)                                         gCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGcc                                                                                                                                                                      >  1:470663/1‑235 (MQ=255)                                         gCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCt                                                                                                                                                                     >  1:1110417/1‑236 (MQ=255)                                                            tGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGtt                                                                                                                                                  <  1:711134/236‑1 (MQ=255)                                                            tGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGtt                                                                                                                                                  <  1:578694/236‑1 (MQ=255)                                                              gcgcGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGtt                                                                                                                                                                                                         <  2:756016/179‑1 (MQ=255)                                                                           acgcagcTCAGGCCTGTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              <  2:985822/191‑1 (MQ=255)                                                                                              cGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTg                                                                                                                                                                                                           >  2:799479/1‑145 (MQ=255)                                                                                              cGGTTTGCGCCAAGATCAGGAAAGCGACGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGACTGCCCCGGGCCCGACGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGACGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCat                                                                                                                                       >  2:644967/1‑213 (MQ=255)                                                                                                 tttGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGAc                                                                                                                                                                             <  1:22460/172‑1 (MQ=255)                                                                                                     cgcCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAg                                                                                                          <  1:942342/235‑1 (MQ=255)                                                                                                     cgcCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAg                                                                                                          <  1:493029/235‑1 (MQ=255)                                                                                                        aaggccggggtcaccctcggcatggccatgaccgaaaaacagggcggcaccgatgtgcgcgccaacactacccgggcctatccggtcggtgcgccgggcccgggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATg                                                                                                                                                                                              <  2:926791‑M2/44‑1 (MQ=255)                                                                                                             tCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTAttga                                                                                                    >  2:758537/1‑231 (MQ=255)                                                                                                                  aaaGCGTCGCACGTCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              <  2:291850/154‑1 (MQ=255)                                                                                                                         cGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCatat                                                                                                                                     >  2:769242/1‑188 (MQ=255)                                                                                                                              aTCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGGGTTGGCGCGCACATCGGTGCCGCCCTGGTTTTc                                                                                                                                                                                                     >  2:307078/1‑119 (MQ=255)                                                                                                                                cGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTc                                                                                                                   <  1:1029978/199‑1 (MQ=255)                                                                                                                                 ggCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTc                                                                                                                                                           <  2:692097/158‑1 (MQ=255)                                                                                                                                 ggCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTAtt                                                                                                      <  2:789254/211‑1 (MQ=255)                                                                                                                                  gcgcCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCa                                                                                                               <  2:527172/201‑1 (MQ=255)                                                                                                                                  catgaccgaaaaacagggcggcaccgatgtgcgcgccaacactaCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCGAGGGTGACCCCGGCCtt                                                                                                                                                                    <  2:926791‑M1/104‑1 (MQ=255)                                                                                                                                      cGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCg                                                                        >  1:733567/1‑236 (MQ=255)                                                                                                                                        aGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGTGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGgcg                                                                                                                                                                                                                               >  1:121053/1‑83 (MQ=255)                                                                                                                                           aGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGc                                                                                                                <  1:857807/191‑1 (MQ=255)                                                                                                                                           aGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGc                                                                                                                >  2:857804/1‑191 (MQ=255)                                                                                                                                             aaCCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAg                                                                                   <  1:1025473/218‑1 (MQ=255)                                                                                                                                                     gtgGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTTCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCCATGCCGGCAcgg                                                                  >  1:38886/1‑227 (MQ=255)                                                                                                                                                          cAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              <  1:150754/114‑1 (MQ=255)                                                                                                                                                          cAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              >  2:150754/1‑114 (MQ=255)                                                                                                                                                          cAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCCACGTTGCGCGGGTCatat                                                                                                                                     >  1:138458/1‑155 (MQ=255)                                                                                                                                                                   cctcttccTGCCCCTGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTAATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCGCAGGCTGCAGgc                                                                                 >  1:78215/7‑198 (MQ=255)                                                                                                                                                                        gCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGc                                          <  2:1110414/232‑1 (MQ=255)                                                                                                                                                                              CCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTAt                                                                                                       <  1:1123075‑M1/165‑1 (MQ=255)                                                                                                                                                                              CCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTcagccagc                                                                                              <  1:980366‑M1/174‑1 (MQ=255)                                                                                                                                                                              CCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTcagccagc                                                                                              >  2:980363‑M1/1‑174 (MQ=255)                                                                                                                                                                              CCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACg                                                         <  1:361138‑M1/211‑1 (MQ=255)                                                                                                                                                                              CCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGcc                                >  1:322177‑M1/1‑236 (MQ=255)                                                                                                                                                                                CGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCAt                                                                                                                                                                                               >  2:499534‑M1/1‑75 (MQ=255)                                                                                                                                                                                CGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCAt                                                                                                                                                                                               <  1:499537‑M1/75‑1 (MQ=255)                                                                                                                                                                                CGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCg                               <  1:893096‑M1/235‑1 (MQ=255)                                                                                                                                                                                 GGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTtgtg                                                                                                                                                                 >  2:1195476‑M1/1‑104 (MQ=255)                                                                                                                                                                                 GGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTtgtg                                                                                                                                                                 <  1:1195479‑M1/104‑1 (MQ=255)                                                                                                                                                                                 GGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGc                             <  1:1148523‑M1/236‑1 (MQ=255)                                                                                                                                                                                     ccGGCGCACCGACCGGATAGGCCCGGGTCGTCTTCGCGCGCACAt                                                                                                                                                                                                                        >  2:24756/1‑45 (MQ=255)                                                                                                                                                                                      tatccggtcggtgcgccgggcccgggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              <  1:777695‑M2/60‑1 (MQ=255)                                                                                                                                                                                      tatccggtcggtgcgccgggcccgggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              >  2:777692‑M2/27‑86 (MQ=255)                                                                                                                                                                                      cGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCggg                                                                                                                                           >  1:812508/1‑121 (MQ=255)                                                                                                                                                                                      cGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCggg                                                                                                                                           <  2:812505/121‑1 (MQ=255)                                                                                                                                                                                      cGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCcggcctcgg                        >  2:1177993/1‑236 (MQ=255)                                                                                                                                                                                                           ccgggTAGTGTTGGCGCGCGCACCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGa                                                                                                                                                                              <  2:22143‑M2/60‑1 (MQ=255)                                                                                                                                                                                                            cgggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCcggtgccggcattgcg                       <  2:470660‑M2/211‑7 (MQ=255)                                                                                                                                                                                                            cgggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGCCTCGGCCTGGCTGTGCAGGTAGGTCAt  <  1:614791‑M2/232‑1 (MQ=255)                                                                                                                                                                                                             gggTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATtcagccaa                                                                                               >  2:1071373‑M2/4‑141 (MQ=255)                                                                                                                                                                                                                |                                                                                                                                                                                                                                        TGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGCGCCAAGGTCAGGAAAGCGTCGCACATCGGCGCCGAGCAGAACCACTTGTGGCCAACCAGCTCATAGGCCTGCCCCGGGCCCGGCGCACCGACCGGATAGGCCCGGGTAGTGTTGGCGCGCACATCGGTGCCGCCCTGTTTTTCGGTCATGGCCATGCCCAGGGTGACCCCGGCCTTGTGCCGGTCGCCAACGTTGCGCGGGTCATATTCGCAGGCAAGGATTTTCGGCAGCCAGTATTCAGCCAGCTCAGGCTGCAGGCGCAATGCCGGCACGGCGGCAAACGTCATGGTCAGCGGGCAGCCGGTGCCGGCCTCGGCCTGGCTGTGCAGGTAGGTCAT  >  AE015451/5441782‑5442220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.