New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 1424647 =63 (0.920)5 (0.080) 5/322 NT 8.3% coding (720/768 nt) PP_1248 Transporter, LysE family
?AE015451 1424687 = 51 (0.780)coding (680/768 nt) PP_1248 Transporter, LysE family

GAGCAGTACACCTTCAAGGAAGGCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTCGACGAACAGCGGGAAAAACGCCATGTAGAACATGATCGCCTTGGGGTTGAGCAGGGTGATCATCATG  >  AE015451/1424418‑1424875
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                    
gagCAGTAAACCTGCAAGGAAGGCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGcc                                                                                                                                                                                                                                   <  2:1037291/233‑1 (MQ=255)
 agCAGTACACCTTCAAGGAAGGCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGcc                                                                                                                                                                                                                               >  1:265450/1‑236 (MQ=255)
      tACACCTTCAAGGAAGGCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTc                                                                                                                                                                                                                           <  1:511202/235‑1 (MQ=255)
        cacCTTCAAGGAAGGCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGc                                                                                                                                                                                                                             <  2:778764/231‑1 (MQ=255)
         acCTTCAAGGAAGGCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCACATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAAc                                                                                                                                                                                                                       >  1:560289/1‑236 (MQ=255)
                aggaaggCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGcc                                                                                                                                                                                                                               >  1:688044/1‑221 (MQ=255)
                aggaaggCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGcc                                                                                                                                                                                                                               <  2:688041/221‑1 (MQ=255)
                   aaggCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACCTATTGGCa                                                                                                                                                                                                              >  1:1026442/1‑235 (MQ=255)
                        aaGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTcgc                                                                                                                                                                                                        >  1:839856/1‑236 (MQ=255)
                          gagCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCgg                                                                                                                                                                                                      >  1:1243282/1‑236 (MQ=255)
                            gCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTcgc                                                                                                                                                                                                        <  2:521867/232‑1 (MQ=255)
                                 tttGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCGGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACatat                                                                                                                                                                                                                   <  1:319080/216‑1 (MQ=255)
                                   tGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGgcgcg                                                                                                                                                                                             >  1:630258/1‑236 (MQ=255)
                                    ggggcgTTGTGCGTGAGCAAGGCCTTTCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTc                                                                                                                                                                                                                           <  1:93753/203‑1 (MQ=255)
                                                        ggCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGt                                                                                                                                                                             <  2:839853/231‑1 (MQ=255)
                                                          ccTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGgcgcg                                                                                                                                                                                             >  1:79612/1‑213 (MQ=255)
                                                          ccTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATgg                                                                                                                                                                       >  1:1199129/1‑235 (MQ=255)
                                                            tATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAAc                                                                                                                                                                                                                       <  2:1252804/185‑1 (MQ=255)
                                                                 gCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCt                                                                                                                                                                                                                            >  1:253291/1‑175 (MQ=255)
                                                                       aaCCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACg                                                                                                                                                           >  2:407250/1‑234 (MQ=255)
                                                                        aCCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCa                                                                                                                                                        <  1:400772/236‑1 (MQ=255)
                                                                        aCCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCa                                                                                                                                                        <  1:1044876/236‑1 (MQ=255)
                                                                        aCCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTCGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACgg                                                                                                                                                          <  1:686863/234‑1 (MQ=255)
                                                                                       aaTGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGcaccac                                                                                                                                                            >  1:731/1‑217 (MQ=255)
                                                                                       aaTGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAg                                                                                                                                          >  1:1174595/1‑235 (MQ=255)
                                                                                                 tGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGt                                                                                                                                                                             <  2:942315/190‑1 (MQ=255)
                                                                                                  gAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCGCCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCa                                                                                                                                                                   >  1:1246959/1‑199 (MQ=255)
                                                                                                  gAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCa                                                                                                                                                    >  2:577711/1‑214 (MQ=255)
                                                                                                  gAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGcc                                                                                                                                                 >  2:555431/1‑217 (MQ=255)
                                                                                                       agcccccGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGgcgg                                                                                                                                                                                              <  1:136969/164‑2 (MQ=255)
                                                                                                         tCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCAc                                                                                                                        <  1:879884/235‑1 (MQ=255)
                                                                                                          ccccGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCg                                                                                                                                                                                   >  1:924788/1‑175 (MQ=255)
                                                                                                           cccGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCCCCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGc                                                                                                                                                         <  1:287842/200‑1 (MQ=255)
                                                                                                             cGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGgc                                                                                                                                                                                                >  2:724701/1‑159 (MQ=255)
                                                                                                              gggAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTAGCGGGCTGGCGCGCATGCGCTCg                                                                                                                                                                                   >  1:196017/1‑171 (MQ=255)
                                                                                                               ggAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCACATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTcg                                                                                                                   <  2:560286/234‑1 (MQ=255)
                                                                                                                     aTGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAg                                                                                                                                                   <  1:1131064/196‑1 (MQ=255)
                                                                                                                             ccGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTcgc                                                                                                                                                                                                        <  2:1027548/135‑1 (MQ=255)
                                                                                                                                          tAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAg                                                                                                                                          >  1:182461/1‑184 (MQ=255)
                                                                                                                                                tGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATAc                                                                                                                                            >  1:678798/1‑176 (MQ=255)
                                                                                                                                                tGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATAc                                                                                                                                            <  2:678795/176‑1 (MQ=255)
                                                                                                                                                    gTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGAt                                                                                                                                                                         >  2:1026209/1‑143 (MQ=255)
                                                                                                                                                    gTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATa                                                                                                                                             >  1:1196917/1‑171 (MQ=255)
                                                                                                                                                    gTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGt                                                                                                                     <  1:74809/195‑1 (MQ=255)
                                                                                                                                                    gTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCa                                                                            >  1:892775/1‑236 (MQ=255)
                                                                                                                                                    gTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCa                                                                            >  1:153300/1‑236 (MQ=255)
                                                                                                                                                     tCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACg                                                                                                 <  2:1199126/214‑1 (MQ=255)
                                                                                                                                                           gcgcCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGAAAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGt                                                                      >  2:631923/1‑235 (MQ=255)
                                                                                                                                                               ccGGACCCTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGc                                                                                                                                                         <  1:347202/148‑1 (MQ=255)
                                                                                                                                                                     acTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGt                                                                                                                                                                             <  1:368932/122‑1 (MQ=255)
                                                                                                                                                                            ggCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTCGACGAACAGCGGGaaaa                                                    >  1:429287/1‑236 (MQ=255)
                                                                                                                                                                                    aTCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAAc                                                                                                       >  1:288859/1‑177 (MQ=255)
                                                                                                                                                                                    aTCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTcg                                                                    >  1:1047592/1‑212 (MQ=255)
                                                                                                                                                                                    aTCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCACCGCCCTGAAACCGAACg                                                                                                 >  2:961885/1‑183 (MQ=255)
                                                                                                                                                                                       cgcgcATCGCCGCCAGTTTGATGCCGAATCCCCCCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGt                                                                                                                                                                             <  2:348893/103‑1 (MQ=255)
                                                                                                                                                                                       aGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGt                                                                                                                                                                             <  2:42256/104‑1 (MQ=255)
                                                                                                                                                                                          gcATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGCCCa                                                                                                                                                                               >  2:188180/1‑99 (MQ=255)
                                                                                                                                                                                           gattgccgtggtgctgacccatcaactggccgagcgcatgcgCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGcaccac                                                                                                                                                            <  1:1204204‑M1/75‑1 (MQ=255)
                                                                                                                                                                                            ctCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTCGACGAACAGCGGGAAAAACGCCATGTAGAACa                                     <  2:892772/234‑1 (MQ=255)
                                                                                                                                                                                            aTCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCgg                                                                                                                                                                                  <  2:123169/94‑1 (MQ=255)
                                                                                                                                                                                            aTCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCCCGGCCAGTTGATGGGTCAGCACCCCGGCACTCAGCCCATa                                                                                                                                             >  2:43701/1‑131 (MQ=255)
                                                                                                                                                                                               gccgtggtgctgacccatcaactggccgagcgcatgcgCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGc                                                                                         >  1:587223‑M1/39‑180 (MQ=255)
                                                                                                                                                                                                     gtgctgacccatcaactggccgagcgcatgcgcg                                                                                                                                                                                                                                     <  2:1077843‑M1/2‑1 (MQ=255)
                                                                                                                                                                                                           acccatcaactggccgagcgcatgcgCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACt                                                                                                                       <  2:587220‑M1/112‑1 (MQ=255)
                                                                                                                                                                                                             gCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGgcgggg                                                                                                                                                                                            <  2:134061/67‑4 (MQ=255)
                                                                                                                                                                                                                   actggccgagcgcatgcgCGCCAGCCGCTCGAACATATTGGCAAtt                                                                                                                                                                                                           <  1:237480‑M1/28‑1 (MQ=255)
                                                                                                                                                                                                                     ccaccgGGCACGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGc                                                                                                                                                         <  2:159062/94‑1 (MQ=255)
                                                                                                                                                                                                                      caccaGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTCGACGAACAGCGGGAAAAACGCCATGTAGAACATGATCGCCTTGGGGTTGa                   <  1:577714/227‑1 (MQ=255)
                                                                                                                                                                                                                        ccgagcgcatgcgCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTcg                                                                    <  2:800096‑M1/163‑1 (MQ=255)
                                                                                                                                                                                                                               aGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTCGACGAACAGCGGGAAAAACGCCATGTAGAACATGATCGCCTTGGGGTTGAGCAGGGTGATCATCATg  <  1:897245/235‑1 (MQ=255)
                                                                                                                                                                                                                                   cccGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTg                                                                                    <  2:885959/149‑1 (MQ=255)
                                                                                                                                                                                                                                    gCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTcgacg                                                                 <  2:1222133‑M1/166‑1 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                    
GAGCAGTACACCTTCAAGGAAGGCAAGAGCCTGTTTGCGGCGTTGTTCGTGAGCAAGGCCTATCAGCTGGAAACCAATTGACTGGGTAATGGCTGAGTGAACAAGTCCCCGGGAACCATGAGTTGCCGGGGGCTTTTTTAGGGTTGCTGTCAGGCGCGCCCGGACACTGTCGGGCTTGGGATCAGCGCATCGCCGCCAGTTTGATGCCGAATCCCACCAGGCAAGCCCCCGCCAGCCGCTCGAACATATTGGCAATTCGCGGGCTGGCGCGCATGCGCTCGGCCAGTTGATGGGTCAGCACCACGGCAATCAGCCCATACAGGAAGGTCACCACCGCCACTGTCGCCGCCATGAAACCGAACGTCACCAGCCCTTGGTGCTTCACCGGGTCGACGAACAGCGGGAAAAACGCCATGTAGAACATGATCGCCTTGGGGTTGAGCAGGGTGATCATCATG  >  AE015451/1424418‑1424875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.