New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3287449 =	44 (0.640)	3 (0.050)	3/306	NT	7.0%	coding (664/813 nt)	xthA	exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI
	?	AE015451	3287465 =	40 (0.640)					coding (648/813 nt)	xthA	exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI

GTGGGGCGGGGGTGGGGGAGGCGTTGAGGTTGGGGTTGTAAGTGTGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAATGCCGATATCACAGTCTTGCGGCGAGATGTTCATGTCGCCCAT  >  AE015451/3287219‑3287665                                                                                                                                                                                                                                       |                                                                                                                                                                                                                         agttccgcaacgaccagccagtgctggtgatgggcgacatgaacatctcgccgcaagactgtgatatcggcattggcccggacaacgccaaacgctggctgaagaccggcaagtgcagcttcctgccggaggagcgtgagtggatggaacgtttgaaaggctgggggttggtagacagcttccgccacctgtacccggacgtgaccgaccgtttcagctggttcgactacCGAAGc                                                                                                                                                                                                                     >  1:1222922‑M1/231‑236 (MQ=255)                                        aaGTGTGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCa                                                                                                                                                                              >  1:560769/1‑236 (MQ=255)                                         aGTGTGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGcc                                                                                                                                                                                                                    >  2:472366/1‑197 (MQ=255)                                         aGTGTGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGcc                                                                                                                                                                                                                    <  1:472369/197‑1 (MQ=255)                                          gtgtGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGACCCAGCTGAAAcggtcg                                                                                                                                                                                  >  2:868599/1‑230 (MQ=255)                                                        tgtgCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTg                                                                                                                                                              >  1:851783/1‑236 (MQ=255)                                                        tgtgCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGACGGTCACGTCCGGGTACAGGTg                                                                                                                                                              >  1:656569/1‑236 (MQ=255)                                                             aCCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCAc                                                                                                                                                                             >  1:921949/1‑216 (MQ=255)                                                             aCCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCAc                                                                                                                                                                             <  2:921946/216‑1 (MQ=255)                                                             aCCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTa                                                                                                                                                                    <  1:1225963/225‑1 (MQ=255)                                                             aCCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTa                                                                                                                                                                    >  2:1225960/1‑225 (MQ=255)                                                                    gCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCcgc                                                                                                                                                                                                                  >  2:1272443/1‑172 (MQ=255)                                                                    gCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTa                                                                                                                                                                    >  1:32650/1‑218 (MQ=255)                                                                    gCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACACCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGt                                                                                                                                                   >  1:894608/1‑235 (MQ=255)                                                                     cccGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTcc                                                                                                                                                 >  2:875166/1‑235 (MQ=255)                                                                            cccTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGa                                                                                                                                                                                                   >  2:778979/1‑179 (MQ=255)                                                                            cccTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTa                                                                                                                                                                    >  2:886214/1‑210 (MQ=255)                                                                                    aacgccaaacgctggctgaagaccggcaagtgcagcttcctgccggaggagcgtgagtggatggaacgtttgaaaggctgggggttggtagacagcttccgccacctgtacccggacgtgaccgaccgtttcagctggttcgactacCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGcc                                                                                                                                   <  1:860345‑M1/88‑1 (MQ=255)                                                                                       tCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGcc                                                                                                                                   >  2:1092354/1‑232 (MQ=255)                                                                                         aaCTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCGTCGGTAGTc                                                                                                                                                                                                     >  2:457701/1‑164 (MQ=255)                                                                                          aCTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTc                                                                                                                               >  2:794504/1‑233 (MQ=255)                                                                                          aCTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCaac                                                                                                                            >  2:876653/1‑235 (MQ=255)                                                                                                   agATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGaa                                                                                                                                                                                                  >  1:659243/1‑157 (MQ=255)                                                                                                        ggCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACt                                                                                                               >  2:851515/1‑235 (MQ=255)                                                                                                        ggCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACt                                                                                                               >  1:1239129/1‑235 (MQ=255)                                                                                                             aTGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCGCGAAGCCGCGGCTTCGGTa                                                                                                                                                                                                        >  2:160254/1‑141 (MQ=255)                                                                                                                              ccctCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAAcggtcgg                                                                                                                                                                                 <  2:32650/144‑1 (MQ=255)                                                                                                                                   ccGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACtt                                                                                   <  1:876656/236‑1 (MQ=255)                                                                                                                                         aGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGt                                                                             >  1:405377/1‑236 (MQ=255)                                                                                                                                                       gtttgaaaggctgggggttggtagacagcttccgccacctgtacccggacgtgcccgaccgtttcagctggttcgactacCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTgg                                                                                                                                                             >  1:273436‑M1/81‑142 (MQ=255)                                                                                                                                                        cccGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCCGCGttt                                                              >  1:1132359/1‑236 (MQ=255)                                                                                                                                                        cccGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCGACCa                                                                                                                                             >  2:692304/1‑157 (MQ=255)                                                                                                                                                             aaggctgggggttggtagacagcttccgccacctgtacccggacgtgaccgaccgtttcagctggttcgactacCGAAGCCGCGGCTTCGGTAGt                                                                                                                                                                                                      >  1:233550‑M1/75‑95 (MQ=255)                                                                                                                                                               ccTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCg                                                                                                                                                           >  2:1170856/1‑136 (MQ=255)                                                                                                                                                               ccTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGGACAGGGGGCGGAAGCTGTCTACCAACCCCCAGc                                                                                                                                    >  2:342008/1‑159 (MQ=255)                                                                                                                                                                       cgcgGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCggg                                                 >  2:1218543/1‑234 (MQ=255)                                                                                                                                                                              gacagcttccgccacctgtacccggacgtgaccgaccgtttcagctggttcgactacCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTtccatcca                                                                                                                 <  2:860342‑M1/106‑1 (MQ=255)                                                                                                                                                                                      ccgccacctgtacccggacgtgaccgaccgtttcagctggttcgactacCGAAGCcgc                                                                                                                                                                                                                  >  1:1015766‑M1/50‑58 (MQ=255)                                                                                                                                                                                            gCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGt                                                      >  1:584030/1‑208 (MQ=255)                                                                                                                                                                                             ccATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAAt                                            <  2:851780/217‑1 (MQ=255)                                                                                                                                                                                               aTGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCt                                                                                         >  1:212731/1‑170 (MQ=255)                                                                                                                                                                                                  aTCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGc                                                >  2:906951/1‑208 (MQ=255)                                                                                                                                                                                                   tCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCtt                                                                          >  1:717923/1‑181 (MQ=255)                                                                                                                                                                                                              cgcAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAATGCCGATATCACAGTCTTGCGGCGAGATGTTc             >  1:801275/1‑231 (MQ=255)                                                                                                                                                                                                               gcAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAATGCCGATATCACAGTCTTgcggc                      >  1:884360/1‑221 (MQ=255)                                                                                                                                                                                                                cAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAATGCCGATATCACAGTCTTGCGGCGAGATGTTCATGTCGc      >  1:501197/1‑236 (MQ=255)                                                                                                                                                                                                                   gCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAATGCCGATATCACAGTCTTGCGGCGAGATGTTCATGTCg       <  2:560766/232‑1 (MQ=255)                                                                                                                                                                                                                    ccGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAATGCCGATATCACAGTCTTGCGGCGAGATGTTCATGTCGCCCAt  >  1:739144/1‑236 (MQ=255)                                                                                                                                                                                                                                tCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAAccc                                                                                                                                         >  1:892717/1‑89 (MQ=255)                                                                                                                                                                                                                                tCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAAccc                                                                                                                                         <  2:892714/89‑1 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                         GTGGGGCGGGGGTGGGGGAGGCGTTGAGGTTGGGGTTGTAAGTGTGGGCCCAAGGTGTGCACCTTGGGCCCGTCACCCTAATCAGCTCAACTCCAGCCAGATCGGCGCATGGTCCGACGGCTTTTCCATCCCGCGCAGCTCATAGTCCACGCCCGCTGCCTTGATGCGCGGCACCAGCTGCTGTGAGGCCATGATCAGGTCGATGCGCAGGCCGCGCTTGGGCTCGTCCTCGAAGCCGCGGCTTCGGTAGTCGAACCAGCTGAAACGGTCGGTCACGTCCGGGTACAGGTGGCGGAAGCTGTCTACCAACCCCCAGCCTTTCAAACGTTCCATCCACTCACGCTCCTCCGGCAGGAAGCTGCACTTGCCGGTCTTCAGCCAGCGTTTGGCGTTGTCCGGGCCAATGCCGATATCACAGTCTTGCGGCGAGATGTTCATGTCGCCCAT  >  AE015451/3287219‑3287665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.