New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3662642 =	66 (0.960)	4 (0.060)	4/328	NT	6.1%	coding (192/1143 nt)	PP_3226	Acyl‑CoA dehydrogenase‑related protein
	?	AE015451	3662663 =	59 (0.890)					coding (171/1143 nt)	PP_3226	Acyl‑CoA dehydrogenase‑related protein

CGTGCGTCGCGCCACGGTGGCGGGCAGGCCACCACGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATG  >  AE015451/3662408‑3662877                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                             aaaagccttttacagccttcatccatgcgaatacggtcttaggcaacgcaccgtcattcagggatgagcctcatgagtcaaccgtccgacagcgctctcgccgagctgacgctggccctcgcggcaaacgccgagcgctacgaccgcagcgcccagttcccccaggacaacttccacttgctgcaccgccacgggctgctcgccctcactgtaccccgtgccttcggcggaggcg                                                                                                                                                                                                                                              <  1:1099144‑M1/1‑1 (MQ=255)                          aGGCCACCACGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCCAGGTCCGCGCCGCCTc                                                                                                                                                                                                                    >  2:563543/1‑235 (MQ=255)                                 cacGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                             <  1:974313/235‑1 (MQ=255)                                    gggCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                          <  1:1227860/235‑1 (MQ=255)                                    gggCCGGAGTACACAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                          <  1:123172/235‑1 (MQ=255)                                         ggAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                             >  2:904398/1‑227 (MQ=255)                                         ggAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACggg                                                                                                                                                                                                     >  1:979640/1‑235 (MQ=255)                                                    ttCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTcc                                                                                                                                                                                                                              <  1:319215/199‑1 (MQ=255)                                                          ttCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGcgca                                                                                                                                                                                   >  1:21863/1‑236 (MQ=255)                                                          ttCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGagca                                                                                                                                                                                   >  1:113796/1‑236 (MQ=255)                                                            cGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCCCGAGCCCCTGCGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGCTCACCCGGCGGG‑CGCTGGCAAGGTCCGcgccg                                                                                                                                                                                                                        >  2:1098657/1‑197 (MQ=255)                                                             gACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGag                                                                                                                                                                                     >  1:1035944/1‑231 (MQ=255)                                                               cgcgCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTccgc                                                                                                                                                                                                                 >  2:959012/1‑201 (MQ=255)                                                                 cgcAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTg                                                                                                                                                                            >  1:771645/1‑236 (MQ=255)                                                                          ttGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCcggcgg                                                                                                                                                                                                                                              <  2:423295/162‑1 (MQ=255)                                                                           tGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCggcggg‑c                                                                                                                                                                                                                                           <  1:1147813/163‑1 (MQ=255)                                                                           tGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGc                                                                                                                                                                                                                                     >  2:71722/1‑169 (MQ=255)                                                                            gATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTgcagca                                                                                                                                                                 <  1:814588/236‑1 (MQ=255)                                                                              tCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATGACCCGGCGGG‑CTCTg                                                                                                                                                                                                                                       >  1:277766/1‑164 (MQ=255)                                                                              tCAGCGCGACGGGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGagca                                                                                                                                                                                   <  1:269319/216‑1 (MQ=255)                                                                                 gcgcgcCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTTGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                          <  2:714372/190‑1 (MQ=255)                                                                                     gcCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACa                                                                                                                                                                                                >  2:1012447/1‑196 (MQ=255)                                                                                        gTGCCGCACGGCATCGGAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                          <  2:673622/183‑1 (MQ=255)                                                                                          gCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGc                                                                                                                                                                                        >  2:1036415/1‑199 (MQ=255)                                                                                           ccGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTcc                                                                                                                                                   <  1:777948/235‑1 (MQ=255)                                                                                            cGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTg                                                                                                                                                 <  1:984249/236‑1 (MQ=255)                                                                                                  gCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAg                                                                                                                                                                                                                                  >  1:326332/1‑149 (MQ=255)                                                                                                  gCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTccgccg                                                                                                                                                                                                               <  2:1014424/168‑1 (MQ=255)                                                                                                    aTCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGGCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTAGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGc                                                                                                                                                                                        <  1:743596/189‑1 (MQ=255)                                                                                                                gcgcTGGCGCGGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCg                                                                                                                                                                              <  2:113796/187‑1 (MQ=255)                                                                                                                  gcTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCCTCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGt                                                                                                                                                                                              >  1:1040154/1‑169 (MQ=255)                                                                                                                  gcTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTgg                                                                                                                                                            >  2:1052389/1‑203 (MQ=255)                                                                                                                        cgcggcaaacgccgagcgctacgaccgcagcgcccagttcccccaggacaacttccacttgctgcaccgccacgggctgctcgccctcactgtaccccgtgccttcggcggaggcg                                                                                                                                                                                                                                              >  1:225866‑M1/116‑116 (MQ=255)                                                                                                                            gggCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGa                                                                                                                                            <  2:1145805/209‑1 (MQ=255)                                                                                                                             ggCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGACAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGcgccgc                                                                                                                                                                                                                       >  2:939364/1‑133 (MQ=255)                                                                                                                               cTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGt                                                                                                              >  1:50885/1‑236 (MQ=255)                                                                                                                                      cggcgcgcTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGt                                                                                                                                                        <  2:1048205/185‑1 (MQ=255)                                                                                                                                                cGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                          <  1:797652/127‑1 (MQ=255)                                                                                                                                                cGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                          >  2:797649/1‑127 (MQ=255)                                                                                                                                                 gTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGc                                                                                             >  1:1213147/1‑235 (MQ=255)                                                                                                                                                 gTCCTGCAGGCGAAAAAGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGTGCAACCTTTGCCGCCCGCGCCGATCGCCCGGCGGG‑CGCGGGCAAGGTCCGCGCCGCGTCCGCCGAAGGc                                                                                                                                                                                                          <  2:903301/126‑1 (MQ=255)                                                                                                                                                             aaaaTGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCTGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGagcagc                                                                                                                                                                                 >  2:646925/1‑139 (MQ=255)                                                                                                                                                                   caggacaacttccacttgctgcaccgccacgggctgctcgccctcactgtaccccgtgccttcggcggaggcGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGaa                                                                                                                                           <  2:1098718‑M1/99‑1 (MQ=255)                                                                                                                                                                         gTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTc                                                                      <  2:1213144/234‑1 (MQ=255)                                                                                                                                                                         gTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTc                                                                      <  2:771642/234‑1 (MQ=255)                                                                                                                                                                             tGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACg                                                                 <  1:643766/235‑1 (MQ=255)                                                                                                                                                                              gCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGTCGGG‑CGCCGGCAAGGTCCGCGCCGCCTCCGCCGACGGCACggg                                                                                                                                                                                                     >  2:187131/1‑102 (MQ=255)                                                                                                                                                                                       ggATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCg                                                                                                                               >  2:945661/1‑163 (MQ=255)                                                                                                                                                                                       ggATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGc                                                                                                 >  2:747135/1‑193 (MQ=255)                                                                                                                                                                                            aGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                             >  1:1023126/1‑80 (MQ=255)                                                                                                                                                                                            aGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                             <  2:1023123/80‑1 (MQ=255)                                                                                                                                                                                              cgcgGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAg                                                    <  2:550572/231‑1 (MQ=255)                                                                                                                                                                                                cgGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTTCAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCTCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGCCCAGCGTCAGCTCGACGAGAGCGCTGCCGGACGGTTGACTc                                                         <  2:762455/224‑1 (MQ=255)                                                                                                                                                                                                cgGTGGCCGGGTCACCTTGGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGt                                                               <  1:656387/218‑1 (MQ=255)                                                                                                                                                                                                 ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                      <  2:393543/114‑1 (MQ=255)                                                                                                                                                                                                 ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                      >  1:393546/1‑114 (MQ=255)                                                                                                                                                                                                 ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                      <  2:485059/114‑1 (MQ=255)                                                                                                                                                                                                 ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                      >  1:485062/1‑114 (MQ=255)                                                                                                                                                                                                     gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCg                                                                                                                                                                              <  1:941116/102‑1 (MQ=255)                                                                                                                                                                                                     gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCg                                                                                                                                                                              >  2:941113/1‑102 (MQ=255)                                                                                                                                                                                                     gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTg                                                                                                                                                             >  1:124381/1‑119 (MQ=255)                                                                                                                                                                                                     gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTg                                         >  1:445943/1‑235 (MQ=255)                                                                                                                                                                                                          gccctcactgtaccccgtgccttcggcggaggcGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                             <  1:284016‑M1/33‑1 (MQ=255)                                                                                                                                                                                                             aCCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGt                                <  1:572673/236‑1 (MQ=255)                                                                                                                                                                                                             aCCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGt                                <  1:642427/236‑1 (MQ=255)                                                                                                                                                                                                              ccTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGt                                <  1:391615/235‑1 (MQ=255)                                                                                                                                                                                                                    ccGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGt                                                                                                                                                        <  2:324719/109‑1 (MQ=255)                                                                                                                                                                                                                      gACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACg                                                                                                                                                                                                       <  1:769031/60‑1 (MQ=255)                                                                                                                                                                                                                      gACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCt                       <  1:1012450/236‑1 (MQ=255)                                                                                                                                                                                                                       cccgtgccttcggcggaggcGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTCAGGGc                                                                                                                                                                                        <  2:741461‑M1/54‑1 (MQ=255)                                                                                                                                                                                                                         cgtgccttcggcggaggcGGGCGCTGGCAAGGTCCGCGCCGCCTCCGCCGGAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGGGGGAGt                                                                                                                                                        <  1:159455‑M1/87‑1 (MQ=255)                                                                                                                                                                                                                         cgcgCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTaa                     <  1:680899/235‑1 (MQ=255)                                                                                                                                                                                                                           cgcCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAg                    >  1:816867/1‑234 (MQ=255)                                                                                                                                                                                                                                  cACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGcc                        <  1:525018/223‑1 (MQ=255)                                                                                                                                                                                                                                           GG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATg  >  1:747138‑M1/1‑236 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                             CGTGCGTCGCGCCACGGTGGCGGGCAGGCCACCACGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATG  >  AE015451/3662408‑3662877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.