New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3662642 =	66 (0.960)	4 (0.060)	4/328	NT	6.1%	coding (192/1143 nt)	PP_3226	Acyl‑CoA dehydrogenase‑related protein
	?	AE015451	3662663 =	59 (0.890)					coding (171/1143 nt)	PP_3226	Acyl‑CoA dehydrogenase‑related protein

AGGCCACCACGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATGAAGGCTGTAAAAGGCTTTT  >  AE015451/3662433‑3662896                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                          aGGCCACCACGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCCAGGTCCGCGCCGCCTc                                                                                                                                                                                                                                       >  2:563543/1‑235 (MQ=255)        cacGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                                                <  1:974313/235‑1 (MQ=255)           gggCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                                             <  1:1227860/235‑1 (MQ=255)           gggCCGGAGTACACAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                                             <  1:123172/235‑1 (MQ=255)                ggAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                                                >  2:904398/1‑227 (MQ=255)                ggAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACggg                                                                                                                                                                                                                        >  1:979640/1‑235 (MQ=255)                                 ttCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGcgca                                                                                                                                                                                                      >  1:21863/1‑236 (MQ=255)                                 ttCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGagca                                                                                                                                                                                                      >  1:113796/1‑236 (MQ=255)                                   cGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCCCGAGCCCCTGCGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGCTCACCCGGCGGG‑CGCTGGCAAGGTCCGcgccg                                                                                                                                                                                                                                           >  2:1098657/1‑197 (MQ=255)                                    gACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGag                                                                                                                                                                                                        >  1:1035944/1‑231 (MQ=255)                                      cgcgCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTccgc                                                                                                                                                                                                                                    >  2:959012/1‑201 (MQ=255)                                        cgcAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTg                                                                                                                                                                                               >  1:771645/1‑236 (MQ=255)                                                   gATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTgcagca                                                                                                                                                                                    <  1:814588/236‑1 (MQ=255)                                                     tCAGCGCGACGGGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGagca                                                                                                                                                                                                      <  1:269319/216‑1 (MQ=255)                                                        gcgcgcCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTTGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                                             <  2:714372/190‑1 (MQ=255)                                                            gcCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACa                                                                                                                                                                                                                   >  2:1012447/1‑196 (MQ=255)                                                               gTGCCGCACGGCATCGGAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                                             <  2:673622/183‑1 (MQ=255)                                                                 gCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGc                                                                                                                                                                                                           >  2:1036415/1‑199 (MQ=255)                                                                  ccGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTcc                                                                                                                                                                      <  1:777948/235‑1 (MQ=255)                                                                   cGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTg                                                                                                                                                                    <  1:984249/236‑1 (MQ=255)                                                                         gCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTccgccg                                                                                                                                                                                                                                  <  2:1014424/168‑1 (MQ=255)                                                                           aTCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGGCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTAGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGc                                                                                                                                                                                                           <  1:743596/189‑1 (MQ=255)                                                                                       gcgcTGGCGCGGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCg                                                                                                                                                                                                 <  2:113796/187‑1 (MQ=255)                                                                                         gcTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCCTCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGt                                                                                                                                                                                                                 >  1:1040154/1‑169 (MQ=255)                                                                                         gcTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTgg                                                                                                                                                                               >  2:1052389/1‑203 (MQ=255)                                                                                                   gggCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGa                                                                                                                                                               <  2:1145805/209‑1 (MQ=255)                                                                                                    ggCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGACAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGcgccgc                                                                                                                                                                                                                                          >  2:939364/1‑133 (MQ=255)                                                                                                      cTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGt                                                                                                                                 >  1:50885/1‑236 (MQ=255)                                                                                                             cggcgcgcTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGt                                                                                                                                                                           <  2:1048205/185‑1 (MQ=255)                                                                                                                       cGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                                             >  2:797649/1‑127 (MQ=255)                                                                                                                       cGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGc                                                                                                                                                                                                                             <  1:797652/127‑1 (MQ=255)                                                                                                                        gTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGc                                                                                                                >  1:1213147/1‑235 (MQ=255)                                                                                                                        gTCCTGCAGGCGAAAAAGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGTGCAACCTTTGCCGCCCGCGCCGATCGCCCGGCGGG‑CGCGGGCAAGGTCCGCGCCGCGTCCGCCGAAGGc                                                                                                                                                                                                                             <  2:903301/126‑1 (MQ=255)                                                                                                                                    aaaaTGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCTGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGagcagc                                                                                                                                                                                                    >  2:646925/1‑139 (MQ=255)                                                                                                                                     ttcccccaggacaacttccacttgctgcaccgccacgggctgctcgccctcactgtaccccgtgccttcggcggaggcggcgcggaccttgccagcgccGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTg                                                                                                                                                                    <  2:1098718‑M2/72‑1 (MQ=255)                                                                                                                                          caggacaacttccacttgctgcaccgccacgggctgctcgccctcactgtaccccgtgccttcggcggaggcGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGaa                                                                                                                                                              <  2:1098718‑M1/99‑1 (MQ=255)                                                                                                                                                gTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTc                                                                                         <  2:771642/234‑1 (MQ=255)                                                                                                                                                gTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTc                                                                                         <  2:1213144/234‑1 (MQ=255)                                                                                                                                                 actcccccttgctgcaccgccacgggctgctcgccctcactgtaccccgtgcctccggcggaggcggcgcggaccttgccagcgcccGCCTCCGCCGAAGGCACg                                                                                                                                                                                                                          <  1:159455‑M2/18‑1 (MQ=255)                                                                                                                                                    tGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACg                                                                                    <  1:643766/235‑1 (MQ=255)                                                                                                                                                     gCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGTCGGG‑CGCCGGCAAGGTCCGCGCCGCCTCCGCCGACGGCACggg                                                                                                                                                                                                                        >  2:187131/1‑102 (MQ=255)                                                                                                                                                              ggATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCg                                                                                                                                                  >  2:945661/1‑163 (MQ=255)                                                                                                                                                              ggATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGc                                                                                                                    >  2:747135/1‑193 (MQ=255)                                                                                                                                                                   aGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                                                >  1:1023126/1‑80 (MQ=255)                                                                                                                                                                   aGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                                                <  2:1023123/80‑1 (MQ=255)                                                                                                                                                                     cgcgGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAg                                                                       <  2:550572/231‑1 (MQ=255)                                                                                                                                                                       cgGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTTCAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCTCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGCCCAGCGTCAGCTCGACGAGAGCGCTGCCGGACGGTTGACTc                                                                            <  2:762455/224‑1 (MQ=255)                                                                                                                                                                       cgGTGGCCGGGTCACCTTGGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGt                                                                                  <  1:656387/218‑1 (MQ=255)                                                                                                                                                                        ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                                         >  1:485062/1‑114 (MQ=255)                                                                                                                                                                        ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                                         >  1:393546/1‑114 (MQ=255)                                                                                                                                                                        ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                                         <  2:485059/114‑1 (MQ=255)                                                                                                                                                                        ggTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTg                                                                                                                                                                                         <  2:393543/114‑1 (MQ=255)                                                                                                                                                                            gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCg                                                                                                                                                                                                 <  1:941116/102‑1 (MQ=255)                                                                                                                                                                            gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCg                                                                                                                                                                                                 >  2:941113/1‑102 (MQ=255)                                                                                                                                                                            gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTg                                                                                                                                                                                >  1:124381/1‑119 (MQ=255)                                                                                                                                                                            gCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTg                                                            >  1:445943/1‑235 (MQ=255)                                                                                                                                                                                 gccctcactgtaccccgtgccttcggcggaggcGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGaa                                                                                                                                                                                                                                <  1:284016‑M1/33‑1 (MQ=255)                                                                                                                                                                                  gccctgactgtaccccgtgccttcggcggaggcggcgcggaccttgccagcgccGCCTCCGCCGAAGGCACggg                                                                                                                                                                                                                        <  2:741461‑M2/20‑1 (MQ=255)                                                                                                                                                                                    aCCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGt                                                   <  1:572673/236‑1 (MQ=255)                                                                                                                                                                                    aCCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGt                                                   <  1:642427/236‑1 (MQ=255)                                                                                                                                                                                     ccTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGt                                                   <  1:391615/235‑1 (MQ=255)                                                                                                                                                                                           ccGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGt                                                                                                                                                                           <  2:324719/109‑1 (MQ=255)                                                                                                                                                                                             gACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACg                                                                                                                                                                                                                          <  1:769031/60‑1 (MQ=255)                                                                                                                                                                                             gACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCt                                          <  1:1012450/236‑1 (MQ=255)                                                                                                                                                                                              cccgtgccttcggcggaggcGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTCAGGGc                                                                                                                                                                                                           <  2:741461‑M1/54‑1 (MQ=255)                                                                                                                                                                                                cgtgccttcggcggaggcGGGCGCTGGCAAGGTCCGCGCCGCCTCCGCCGGAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGGGGGAGt                                                                                                                                                                           <  1:159455‑M1/87‑1 (MQ=255)                                                                                                                                                                                                cgcgCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTaa                                        <  1:680899/235‑1 (MQ=255)                                                                                                                                                                                                  cgcCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAg                                       >  1:816867/1‑234 (MQ=255)                                                                                                                                                                                                       ttcggcggaggcggcgcggaccttgccagcgccGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGc                                                                                                                                                                                                           <  1:284016‑M2/33‑1 (MQ=255)                                                                                                                                                                                                         cACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGcc                                           <  1:525018/223‑1 (MQ=255)                                                                                                                                                                                                                  GG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATg                     >  1:747138‑M1/1‑236 (MQ=255)                                                                                                                                                                                                                   G‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATGa                    >  1:904401‑M1/1‑236 (MQ=255)                                                                                                                                                                                                                       CTGGCAAGGTCCGCGTCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAg                                                                       >  2:637824‑M1/1‑182 (MQ=255)                                                                                                                                                                                                                                tCCGCGCCGCATCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGAcc                                    <  1:553750/208‑1 (MQ=255)                                                                                                                                                                                                                                       cGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCcgcg                                                                                                                         >  1:225866‑M2/2‑116 (MQ=255)                                                                                                                                                                                                                                       cGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATGAAGGCTGTAAAAGGCtttt  <  1:1099144‑M2/234‑1 (MQ=255)                                                                                                                                                                                                                                        gccTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCACGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGt                                                   <  1:993829/185‑1 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                          AGGCCACCACGGGCCGGAGTACCCAGTTCAGGTTCGACGCGCAGTGCGTTGATCAGCGCGCCGTGCCGCACGGCATCGTAAGCCACGCGCTGGCGCAGGGGCTCGGGCCAGCGCGCTTCGTCCTGCAGGCGAAAATGCTGCAGGTATTGCATCACCAGGATCAGCGCGGTGGCCGGGTCACCTTTGCCGACCGCGCCGATCACCCGGCGGG‑CGCTGGCAAGGTCCGCGCCGCCTCCGCCGAAGGCACGGGGTACAGTGAGGGCGAGCAGCCCGTGGCGGTGCAGCAAGTGGAAGTTGTCCTGGGGGAACTGGGCGCTGCGGTCGTAGCGCTCGGCGTTTGCCGCGAGGGCCAGCGTCAGCTCGGCGAGAGCGCTGTCGGACGGTTGACTCATGAGGCTCATCCCTGAATGACGGTGCGTTGCCTAAGACCGTATTCGCATGGATGAAGGCTGTAAAAGGCTTTT  >  AE015451/3662433‑3662896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.