New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4865140	47 (0.680)	4 (0.060)	4/320	NT	8.5%	coding (733/3489 nt)	smc	Chromosome partition protein Smc
	?	AE015451	= 4865159	42 (0.650)					coding (714/3489 nt)	smc	Chromosome partition protein Smc

CTGCAACTGCCGCAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCGCGGCGGCGCTCCTTGTATTTGGAAATGCC  >  AE015451/4864919‑4865368                                                                                                                                                                                                                              |                                                                                                                                                                                                                                      cTGCAGCGGCCGCAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCa                                                                                                                                                                                                                        <  1:351935/236‑1 (MQ=255)            gCAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTa                                                                                                                                                                                                                                     >  1:1049752/1‑213 (MQ=255)             cAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgccagc                                                                                                                                                                                                            >  1:405524‑M2/1‑229 (MQ=255)             cAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgccagc                                                                                                                                                                                                            <  1:191181‑M2/236‑8 (MQ=255)                       tgGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGTTCACCGATTCGCGCTGGCGTAC‑TTGt                                                                                                                                                                                                                               >  2:681950/1‑207 (MQ=255)                         gCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACa                                                                                                                                                                                                <  1:1242626/236‑1 (MQ=255)                            gTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgcca                                                                                                                                                                                                              >  1:440957‑M2/1‑214 (MQ=255)                             tGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCTCCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGtct                                                                                                                                                                                                                   <  1:107253/213‑1 (MQ=255)                                  aaTGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAg                                                                                                                                                                                                   <  2:879340/224‑1 (MQ=255)                                            tcGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGcc                                                                                                                                                                              >  1:645142/1‑235 (MQ=255)                                              gACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTc                                                                                                                                                                                                                             <  2:438935/186‑1 (MQ=255)                                                      cGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑t                                                                                                                                                                                                                                  <  2:603088/173‑1 (MQ=255)                                                       gATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCt                                                                                                                                                                  <  1:977742/236‑1 (MQ=255)                                                        aTGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCCGACAGGCGCGCttt                                                                                                                                                                                      >  1:1142844/1‑215 (MQ=255)                                                         tGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCa                                                                                                                                                                                                                        <  2:509227/180‑1 (MQ=255)                                                             aCCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACt                                                                                                                                                            >  1:988051/1‑236 (MQ=255)                                                               cGGCCCCCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCa                                                                                                                                                          <  1:153974/236‑1 (MQ=255)                                                                         gTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACtt                                                                                                                                                  >  1:1134857/1‑234 (MQ=255)                                                                                cGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACtttt                                                                                                                                                <  1:522001/229‑1 (MQ=255)                                                                                 ggCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACtttt                                                                                                                                                <  1:958667/228‑1 (MQ=255)                                                                                 ggCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCt                                                                                                                                           <  2:1097810/233‑1 (MQ=255)                                                                                     cTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTcc                                                                                                                                                                         <  2:458843/199‑1 (MQ=255)                                                                                     cTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGATCCTTGTACTCACGGTACTTTTCGGCTgcctg                                                                                                                                      >  2:411393/1‑234 (MQ=255)                                                                                      tGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgcac                                                                                                                                                                                                              <  2:244200‑M2/161‑6 (MQ=255)                                                                                      tGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTgcctg                                                                                                                                      >  2:779208/1‑233 (MQ=255)                                                                                                tGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATg                                                                                                                          >  1:998029/1‑235 (MQ=255)                                                                                                     cGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAg                                                                                                                       >  2:820693/1‑233 (MQ=255)                                                                                                           gACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAgg                                                                                                                                                                                                      >  2:1166092/1‑148 (MQ=255)                                                                                                           gACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAg                                                                                                              >  1:184837/1‑236 (MQ=255)                                                                                                                ttCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTgcctgggcc                                                                                                                                  <  1:883462/211‑1 (MQ=255)                                                                                                                  cGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGc                                                                                                                                                                    <  2:893334/175‑1 (MQ=255)                                                                                                                             tCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGCTCACCGATTCCCGCCGGCGTCC‑TTGTTCGTCCCGGTCTCGCCCGCGCa                                                                                                                                                                                                         >  2:54647/1‑127 (MQ=255)                                                                                                                             tCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGgcgcgcgg                                                                                                                                                                                       >  2:993814/1‑143 (MQ=255)                                                                                                                              cgcgCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCGCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCt                                                                                                                                                                  <  1:1051043/165‑1 (MQ=255)                                                                                                                               gcgcAGGCTTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAg                                                                                                              <  1:25448/216‑1 (MQ=255)                                                                                                                                        ttCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTGGTACTCACgg                                                                                                                                                       >  2:197020/1‑166 (MQ=255)                                                                                                                                         tCGATTCTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTACTTTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGc                                                                                                             <  1:371306/208‑1 (MQ=255)                                                                                                                                                tGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGAt                                                                                                                           <  1:137924/186‑1 (MQ=255)                                                                                                                                                   cATCCGCATTGCGCTGCTCGGCCCCCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTCC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactggtggccgagcagcgcaatgccga                                                                                                                                         >  1:178035‑M2/1‑95 (MQ=255)                                                                                                                                                     tCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGagacctggacgaacaaggacgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactgggggccgagcagcgcaatgcggatg                                                                                                                                        >  1:178035‑M1/1‑74 (MQ=255)                                                                                                                                                      cGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttc                                                                                                                                                                             >  2:661353‑M2/1‑92 (MQ=255)                                                                                                                                                      cGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCt                                                                                                            >  2:1079806/1‑195 (MQ=255)                                                                                                                                                        gCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGt                                                                  >  1:175483/1‑235 (MQ=255)                                                                                                                                                               gctgctCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTTC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTcc                                                             >  2:767470/1‑233 (MQ=255)                                                                                                                                                               gctgctCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCaa                                                                                                                                                                                                        >  2:163435/1‑94 (MQ=255)                                                                                                                                                                 tgctCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTgcct                                                                                                                                       >  2:871114/1‑157 (MQ=255)                                                                                                                                                                      ggCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGttt                                                                >  2:862502/1‑223 (MQ=255)                                                                                                                                                                                gCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGcc                                                                                                                                                                   >  2:307644/1‑114 (MQ=255)                                                                                                                                                                                       gagaAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGagacctggacgaacaagtacgcca                                                                                                                                                                                                               >  2:748015‑M1/1‑40 (MQ=255)                                                                                                                                                                                       gagaAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGagacctggacgaacaagtacgcca                                                                                                                                                                                                               <  1:748018‑M1/64‑25 (MQ=255)                                                                                                                                                                                         gaAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGagacctggacgaacaagtacgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactggtggccgagcagcgcaatgccg                                                                                                                                           >  2:661353‑M1/1‑38 (MQ=255)                                                                                                                                                                                             cGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAg                                                                    >  1:134306/1‑196 (MQ=255)                                                                                                                                                                                              gaccTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCGCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTcgc                              <  1:256532/231‑1 (MQ=255)                                                                                                                                                                                              gCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCgcgg                            <  1:820696/235‑1 (MQ=255)                                                                                                                                                                                              gCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGGTCTCGGTTTCgcgg                            >  1:514223/1‑235 (MQ=255)                                                                                                                                                                                                       gCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAggg                                                                                    >  1:226577/1‑169 (MQ=255)                                                                                                                                                                                                                      gcgcTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCGCGGCGgcgc                      <  1:1041184/217‑1 (MQ=255)                                                                                                                                                                                                                       ggcTGGCGTAC‑TTGTGCGGCCAGGGCTCGCCAGCGCAAGGCAGACAGGCGCGCTGTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGc                                                                                                                                            <  2:23125/97‑1 (MQ=255)                                                                                                                                                                                                                        gcTGGCGagacctggacgaacaagtacgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactggtggccgagcagcgcaatgccgatgccagtatcgaacgcctgcgcgacggtcatcacgaactgtccgaacgcttcaaccaggtgcagggccgtttctactcggtggccggtgacatcgcccgggtcgagcagagcattcagcacggccagcagcgcctg  <  1:191181‑M1/236‑230 (MQ=255)                                                                                                                                                                                                                        gcTGGCGagacctggacgaacaagtacgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactggtggccgagcagcgcaatgccgatgccagtatcgaacgcctgcgcgacggtcatcacgaactgtccgaacgcttcaaccaggtgcagggccgtttctactcggtggccggtgacatcgcccgggtcgagcagagcattcagcacggccagcagcgcctg  >  1:405524‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                        gcTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGGTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTgct                                                     >  2:699497/1‑183 (MQ=255)                                                                                                                                                                                                                          tGGCGagacctggacgaacaagtacgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactggtggccgagcagcgcaatgccgatgccagtatcgaacgcctgcgcgacggtcatcacgaactgtccgaacgcttcaaccaggtgcagggccgtttctactcggtggccggtgacatcgcccgggtcgagcagagcattcagcac                 >  1:440957‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                          tGGCGTAC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttctc                                                                                                                                                                           <  1:748018‑M2/64‑41 (MQ=255)                                                                                                                                                                                                                          tGGCGTAC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttctc                                                                                                                                                                           >  2:748015‑M2/1‑24 (MQ=255)                                                                                                                                                                                                                          tGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGc                                                                                                                                                                                  <  1:147916/57‑1 (MQ=255)                                                                                                                                                                                                                          tGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGc                                                                                                                                                                                  >  2:147916/1‑57 (MQ=255)                                                                                                                                                                                                                          gtgcgagacctggacgaacaagtacgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactggtggccgagcagcgcaatgccgatgccagtatcgaacgcctgcgcgacggtcatcacgaactgtccgaacgcttcaaccaggtgca                                                                           <  2:244200‑M1/159‑157 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                                      CTGCAACTGCCGCAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCGCGGCGGCGCTCCTTGTATTTGGAAATGCC  >  AE015451/4864919‑4865368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.