New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4865140	47 (0.680)	4 (0.060)	4/320	NT	8.5%	coding (733/3489 nt)	smc	Chromosome partition protein Smc
	?	AE015451	= 4865159	42 (0.650)					coding (714/3489 nt)	smc	Chromosome partition protein Smc

CAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCGCGGCGGCGCTCCTTGTATTTGGAAATGCCAGCCGCTTCCTCGATGAAGTTGCG  >  AE015451/4864931‑4865392                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          cAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgccagc                                                                                                                                                                                                                                    >  1:405524‑M2/1‑229 (MQ=255) cAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgccagc                                                                                                                                                                                                                                    <  1:191181‑M2/236‑8 (MQ=255)             gCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACa                                                                                                                                                                                                                        <  1:1242626/236‑1 (MQ=255)                gTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgcca                                                                                                                                                                                                                                      >  1:440957‑M2/1‑214 (MQ=255)                 tGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCTCCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGtct                                                                                                                                                                                                                                           <  1:107253/213‑1 (MQ=255)                      aaTGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAg                                                                                                                                                                                                                           <  2:879340/224‑1 (MQ=255)                                tcGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGcc                                                                                                                                                                                                      >  1:645142/1‑235 (MQ=255)                                           gATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCt                                                                                                                                                                                          <  1:977742/236‑1 (MQ=255)                                            aTGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCCGACAGGCGCGCttt                                                                                                                                                                                                              >  1:1142844/1‑215 (MQ=255)                                                 aCCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACt                                                                                                                                                                                    >  1:988051/1‑236 (MQ=255)                                                   cGGCCCCCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCa                                                                                                                                                                                  <  1:153974/236‑1 (MQ=255)                                                             gTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACtt                                                                                                                                                                          >  1:1134857/1‑234 (MQ=255)                                                                    cGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACtttt                                                                                                                                                                        <  1:522001/229‑1 (MQ=255)                                                                     ggCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACtttt                                                                                                                                                                        <  1:958667/228‑1 (MQ=255)                                                                     ggCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCt                                                                                                                                                                   <  2:1097810/233‑1 (MQ=255)                                                                         cTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTcc                                                                                                                                                                                                 <  2:458843/199‑1 (MQ=255)                                                                         cTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGATCCTTGTACTCACGGTACTTTTCGGCTgcctg                                                                                                                                                              >  2:411393/1‑234 (MQ=255)                                                                          tGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgcac                                                                                                                                                                                                                                      <  2:244200‑M2/161‑6 (MQ=255)                                                                          tGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTgcctg                                                                                                                                                              >  2:779208/1‑233 (MQ=255)                                                                                    tGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATg                                                                                                                                                  >  1:998029/1‑235 (MQ=255)                                                                                         cGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAg                                                                                                                                               >  2:820693/1‑233 (MQ=255)                                                                                               gACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAgg                                                                                                                                                                                                                              >  2:1166092/1‑148 (MQ=255)                                                                                               gACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAg                                                                                                                                      >  1:184837/1‑236 (MQ=255)                                                                                                    ttCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTgcctgggcc                                                                                                                                                          <  1:883462/211‑1 (MQ=255)                                                                                                      cGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGc                                                                                                                                                                                            <  2:893334/175‑1 (MQ=255)                                                                                                                 tCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGCTCACCGATTCCCGCCGGCGTCC‑TTGTTCGTCCCGGTCTCGCCCGCGCa                                                                                                                                                                                                                                 >  2:54647/1‑127 (MQ=255)                                                                                                                 tCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGgcgcgcgg                                                                                                                                                                                                               >  2:993814/1‑143 (MQ=255)                                                                                                                  cgcgCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCGCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCt                                                                                                                                                                                          <  1:1051043/165‑1 (MQ=255)                                                                                                                   gcgcAGGCTTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAg                                                                                                                                      <  1:25448/216‑1 (MQ=255)                                                                                                                            ttCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTGGTACTCACgg                                                                                                                                                                               >  2:197020/1‑166 (MQ=255)                                                                                                                             tCGATTCTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTACTTTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGc                                                                                                                                     <  1:371306/208‑1 (MQ=255)                                                                                                                                    tGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGAt                                                                                                                                                   <  1:137924/186‑1 (MQ=255)                                                                                                                                       cATCCGCATTGCGCTGCTCGGCCCCCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTCC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttctcacgaggcactggtggccgagcagcgcaatgccga                                                                                                                                                                 >  1:178035‑M2/1‑95 (MQ=255)                                                                                                                                          cGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttc                                                                                                                                                                                                     >  2:661353‑M2/1‑92 (MQ=255)                                                                                                                                          cGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCt                                                                                                                                    >  2:1079806/1‑195 (MQ=255)                                                                                                                                            gCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGt                                                                                          >  1:175483/1‑235 (MQ=255)                                                                                                                                                   gctgctCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTTC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTcc                                                                                     >  2:767470/1‑233 (MQ=255)                                                                                                                                                   gctgctCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCaa                                                                                                                                                                                                                                >  2:163435/1‑94 (MQ=255)                                                                                                                                                     tgctCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTgcct                                                                                                                                                               >  2:871114/1‑157 (MQ=255)                                                                                                                                                          ggCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGttt                                                                                        >  2:862502/1‑223 (MQ=255)                                                                                                                                                                    gCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGcc                                                                                                                                                                                           >  2:307644/1‑114 (MQ=255)                                                                                                                                                                                 cGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAg                                                                                            >  1:134306/1‑196 (MQ=255)                                                                                                                                                                                  gaccTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCGCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTcgc                                                      <  1:256532/231‑1 (MQ=255)                                                                                                                                                                                  gCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCgcgg                                                    <  1:820696/235‑1 (MQ=255)                                                                                                                                                                                  gCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGGTCTCGGTTTCgcgg                                                    >  1:514223/1‑235 (MQ=255)                                                                                                                                                                                           gCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAggg                                                                                                            >  1:226577/1‑169 (MQ=255)                                                                                                                                                                                                          gcgcTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCGCGGCGgcgc                                              <  1:1041184/217‑1 (MQ=255)                                                                                                                                                                                                           ggcTGGCGTAC‑TTGTGCGGCCAGGGCTCGCCAGCGCAAGGCAGACAGGCGCGCTGTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGc                                                                                                                                                                    <  2:23125/97‑1 (MQ=255)                                                                                                                                                                                                            gcTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGGTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTgct                                                                             >  2:699497/1‑183 (MQ=255)                                                                                                                                                                                                              tGGCGTAC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttctc                                                                                                                                                                                                   >  2:748015‑M2/1‑24 (MQ=255)                                                                                                                                                                                                              tGGCGTAC‑TTGTTCGTCCAGGTCTcgccagcgcgaatcggtgatcggcgatcagggcgtttctc                                                                                                                                                                                                   <  1:748018‑M2/64‑41 (MQ=255)                                                                                                                                                                                                              tGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGc                                                                                                                                                                                                          <  1:147916/57‑1 (MQ=255)                                                                                                                                                                                                              tGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGc                                                                                                                                                                                                          >  2:147916/1‑57 (MQ=255)                                                                                                                                                                                                                    aC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCgcgc                                                                                                                <  2:515189/141‑1 (MQ=255)                                                                                                                                                                                                                                    tctcGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCGCGGCGGCGCTCCTTGTATTTGGAAATGCCAGCCGCTTCCTCGATGAAGTTgcg  <  1:307645/236‑1 (MQ=255)                                                                                                                                                                                                                                      tcGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCGCGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTc                                                                                                                    <  2:103546/120‑1 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          CAGGCGCTGCTGGCCGTGCTGAATGCTCTGCTCGACCCGGGCGATGTCACCGGCCACCGAGTAGAAACGGCCCTGCACCTGGTTGAAGCGTTCGGACAGTTCGTGATGACCGTCGCGCAGGCGTTCGATACTGGCATCGGCATTGCGCTGCTCGGCCACCAGTGCCTCGTGAGAAACGCCCTGATCGCCGATCACCGATTCGCGCTGGCGTAC‑TTGTTCGTCCAGGTCTCGCCAGCGCAAGGCAGACAGGCGCGCTTTCAGCTGCCGCTCCTGAGCCTTGTACTCACGGTACTTTTCGGCTGCCTGGGCCTGGCGATGCAGACGCTCCAGCTGGCGCTCGAGCTCTTCGCGCAGGTCGGTCAGGCGCGCCAGGTTTTCCTGGGTGCGGCGGATGCGGTTCTCGGTTTCGCGGCGGCGCTCCTTGTATTTGGAAATGCCAGCCGCTTCCTCGATGAAGTTGCG  >  AE015451/4864931‑4865392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.