New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 5441018 =68 (0.990)3 (0.050) 3/322 NT 4.3% coding (1566/1653 nt) PP_4780 putative Acyl‑CoA dehydrogenase
?AE015451 5441085 = 69 (1.060)coding (1499/1653 nt) PP_4780 putative Acyl‑CoA dehydrogenase
Rejected: Frequency below/above cutoff threshold.

CGGGGGTATCAACGACTACAAAAGCGTGGCTCACACTGTGCTTCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCACCCAGTTCGACAAACAGTGCATCGAGTACGCCCGGCTCCTTGGA  >  AE015451/5440792‑5441251
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                         
cGGGGGTATCAACGACTACAAAAGCGTGGCTCACACTGTGCTTCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCgg                                                                                                                                                                                                                                  >  1:59361/1‑236 (MQ=255)
               agggctcgggcaacgtgcagtgcctggatgtgctgcgggccttgtccaaggagccgggcgtactcgatgcactgtttgtcgaactgggtgacgggcatggcgacccgcgcctggcggcgcatatcggcaacctcaagggggcgtttgccgacaccggtgacatgcagtaccgcgcgcggcaactgaccgaggatattgccctggcgttgcaGGCCaa                                                                                                                                                                                                                                      <  1:788009‑M1/6‑1 (MQ=255)
                     aaGCGTGGCTCACACTGTGCTTCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAg                                                                                                                                                                                                                                     >  2:565332/1‑212 (MQ=255)
                             cTCACACTGTGCTTCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCgg                                                                                                                                                                                                                                  >  1:1053321/1‑207 (MQ=255)
                             cTCACACTGTGCTTCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTg                                                                                                                                                                                                      >  1:590887/1‑235 (MQ=255)
                                         ttCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCCCCGCCCCAg                                                                                                                                                                                                                                     >  2:250845/1‑192 (MQ=255)
                                         ttCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTGGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGc                                                                                                                                                                                            <  2:1084686/233‑1 (MQ=255)
                                              gTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCcag                                                                                                                                                                                      >  1:721557/1‑234 (MQ=255)
                                               tCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCaac                                                                                                                                                                                                                                     >  2:1248273/1‑185 (MQ=255)
                                                               aTCCATCTTGCCTGCCTTCTTGGTTAAATACCCCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGcc                                                                                                                                                                         <  1:250845/230‑1 (MQ=255)
                                                                  cATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCAt                                                                                                                                                                                                                  >  2:738156/1‑186 (MQ=255)
                                                                  cATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACg                                                                                                                                                                  <  1:939999/234‑1 (MQ=255)
                                                                     cTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAg                                                                                                                                                                                                                                     >  2:862273/1‑164 (MQ=255)
                                                                            gcctTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGcc                                                                                                                                                                         <  2:532187/217‑1 (MQ=255)
                                                                                 cttGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCAt                                                                                                                                                                                                   <  2:1101216/186‑1 (MQ=255)
                                                                                         aaTACGCCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATaa                                                                                                                                                                                                                        <  2:487062/157‑1 (MQ=255)
                                                                                          aTACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGc                                                                                                                                        >  1:774518/1‑236 (MQ=255)
                                                                                           tgtcgaactgggtgacgggcatggcgacccgcgcctggcggcgcatatcggcaacctcaagggggcgtttgccgacaccggtgacatgcagtaccgcgcgcggcaactgaccgaggatattgccctggcgttgcaGGCCAAg                                                                                                                                                                                                                                     >  2:942257‑M1/136‑142 (MQ=255)
                                                                                             cacCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCcgc                                                                                                                                     <  1:1013701/236‑1 (MQ=255)
                                                                                                  ccATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCcgcgcgcg                                                                                                                                <  1:550996/236‑1 (MQ=255)
                                                                                                   cATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACGAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCcagcag                                                                                                                                                                                   >  1:399878/1‑184 (MQ=255)
                                                                                                   cATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCcag                                                                                                                                                                                      >  2:894431/1‑181 (MQ=255)
                                                                                                   cATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGt                                                                                                                                               >  1:1050642/1‑220 (MQ=255)
                                                                                                      tGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCcagcag                                                                                                                                                                                   >  1:806667/1‑181 (MQ=255)
                                                                                                       gATCGGGGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTc                                                                                                                                                  <  2:1154596/213‑1 (MQ=255)
                                                                                                           ggTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCcgcgcgcg                                                                                                                                <  1:388104/227‑1 (MQ=255)
                                                                                                             tgtTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCg                                                                                                                                                                                                                            >  2:191202/1‑133 (MQ=255)
                                                                                                             tgtTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGCTCAGTTGCcgcg                                                                                                                                    >  2:744250/1‑221 (MQ=255)
                                                                                                                tGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGTCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACg                                                                                                                                                                  >  1:384180/1‑188 (MQ=255)
                                                                                                                     tCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGgt                                                                                                              >  1:1189401/1‑235 (MQ=255)
                                                                                                                         tCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGccggtggt                                                                                                                                                                   <  2:469044/178‑7 (MQ=255)
                                                                                                                          cgcgGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCcag                                                                                                                                                                                      >  2:1220552/1‑158 (MQ=255)
                                                                                                                          cgcgGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCt                                                                                                                                                                              >  1:1114336/1‑166 (MQ=255)
                                                                                                                          cgcgGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGc                                                                                                                                                                 <  1:1015535/179‑1 (MQ=255)
                                                                                                                          cgcgGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGc                                                                                                                                                                 >  2:1015532/1‑179 (MQ=255)
                                                                                                                          cgcgGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCCGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCgg                                                                                                         >  1:767016/1‑235 (MQ=255)
                                                                                                                          cgcgGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCg                                                                                                                >  2:911312/1‑228 (MQ=255)
                                                                                                                          cgcgGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCgg                                                                                                         >  1:909411/1‑235 (MQ=255)
                                                                                                                                     ccGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCcgcgcgcg                                                                                                                                <  1:942491/201‑1 (MQ=255)
                                                                                                                                               aGGGGCCAGGCAGGCGTCGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCCTCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGtt                                                                                                                                          <  1:123685/181‑1 (MQ=255)
                                                                                                                                                      aggcaggcGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACCGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTCCAACGCCAGGGCAATATCCTCGGGCAGTTGc                                                                                                                                        >  1:378948/1‑176 (MQ=255)
                                                                                                                                                         caggcGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGc                                                                                                                                                                 >  2:881072/1‑148 (MQ=255)
                                                                                                                                                           ggcGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATgcgc                                                                          <  2:774515/233‑1 (MQ=255)
                                                                                                                                                               ttgccgacaccggtgacatgcagtaccgcgcgcggcaactgaccgaggatattgccctggcgttgcaGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAat                                                                                                                                                        <  2:1191574‑M1/84‑1 (MQ=255)
                                                                                                                                                                aGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCCGCCATGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCGGCTTGCCCTGCAACGCCAGCGCAATATCCTCGGTCAGTTGCcgcgcg                                                                                                                                  >  1:126163/1‑172 (MQ=255)
                                                                                                                                                                        tgACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCAGCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGcc                                                                                                                                       <  1:1200722/159‑1 (MQ=255)
                                                                                                                                                                         gACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGc                                                         >  1:140481/1‑236 (MQ=255)
                                                                                                                                                                         gACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGCCCACCACCAGCCa                                                                                                                                                                                                                                       >  2:1953/1‑62 (MQ=255)
                                                                                                                                                                             aaTGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATg                                                     <  1:646301/236‑1 (MQ=255)
                                                                                                                                                                               tGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCaaa                                                                                                     >  2:788006/1‑186 (MQ=255)
                                                                                                                                                                               cgCCATCACACTTACACCTCGCGGCAGCGCCCCGTCCACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCgccgcc                                                                      <  1:143281/216‑1 (MQ=255)
                                                                                                                                                                                 ccATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCACGCGGCTGCCGCTACACGCATCACTCCCGTCTGCATCCCCCGCCTcc                                                                                                                                                                                        >  2:45363/1‑101 (MQ=255)
                                                                                                                                                                                 ccATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGcc                                                   >  2:752697/1‑234 (MQ=255)
                                                                                                                                                                                  cATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCTCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTGGCCGATAGGCGCCGCCAgg                                                                   >  1:119926/1‑217 (MQ=255)
                                                                                                                                                                                    tCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCcgcgcg                                                                                                                                  <  2:582265/152‑1 (MQ=255)
                                                                                                                                                                                          ttACGCCTCGCGGCAGCGCCCCGTACCCCCGCCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCaa                                                                                                                                                                    <  2:384177/112‑1 (MQ=255)
                                                                                                                                                                                           cgcgcggcaactgaccgaggatattgccctggcgttgcaGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCACGGCCATATCCTCGGTCAGCTGCcgcg                                                                                                                                    <  2:675795‑M1/104‑1 (MQ=255)
                                                                                                                                                                                            cccccTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCGCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCAccc                                           <  1:32667/228‑1 (MQ=255)
                                                                                                                                                                                            acacCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAgg                                                                                        >  2:414942/1‑186 (MQ=255)
                                                                                                                                                                                            acacCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAgg                                                                                        <  1:414945/186‑1 (MQ=255)
                                                                                                                                                                                            acacCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCAccc                                           <  1:191202/231‑1 (MQ=255)
                                                                                                                                                                                                   aactgaccgaggatattgccctggcgttgcaGGCCAAGCGGCTGCCGAGAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTa                                                                                                                             <  1:247758‑M1/111‑1 (MQ=255)
                                                                                                                                                                                                     ggCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGgcgc                                                                >  2:1034620/1‑201 (MQ=255)
                                                                                                                                                                                                           gcCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAACCGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCACCCAGTTCGACa                                  <  1:60711/225‑1 (MQ=255)
                                                                                                                                                                                                           gcCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGTCAAACGCCCCCTTGAGGTTGCCGat                                                                                >  2:496324/1‑179 (MQ=255)
                                                                                                                                                                                                           gcCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCACCCAGTTCGACAAACAGTGCAt                        <  1:862276/235‑1 (MQ=255)
                                                                                                                                                                                                             cccGTCCCCCCGGCCACCACCGGCTAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACt                                                                                                                           <  2:208375/134‑1 (MQ=255)
                                                                                                                                                                                                                gTACACCCGTCCACCACCGGCCAAGCGGCTGCCGATAAACTCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAggg                                                                                                                                                            <  2:399875/98‑1 (MQ=255)
                                                                                                                                                                                                                  acacCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCg                                                                                                                >  2:810291/1‑140 (MQ=255)
                                                                                                                                                                                                                            accaccGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGatat                                                                              >  2:1007631/1‑164 (MQ=255)
                                                                                                                                                                                                                            accaccGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGatat                                                                              >  1:397010/1‑164 (MQ=255)
                                                                                                                                                                                                                            accaccGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGatat                                                                              <  2:397007/164‑1 (MQ=255)
                                                                                                                                                                                                                            accaccGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGatat                                                                              <  1:1007634/164‑1 (MQ=255)
                                                                                                                                                                                                                            accaccGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCACCCAGTTCGa                                    >  2:675711/1‑206 (MQ=255)
                                                                                                                                                                                                                                ccGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCACCCAGTTCGACAAACAGTGCATCAAGTACGCCCGGCTCCTTgg   >  2:877017/1‑235 (MQ=255)
                                                                                                                                                                                                                                 cGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCCCCGGTGTCGGCAAACGcccc                                                                                               >  1:1037262/1‑142 (MQ=255)
                                                                                                                                                                                                                                 cGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCACCCAGTTCGACAAACAGTGCATCGAGTACGCCCGGCTCCTTGGa  >  1:897204/1‑235 (MQ=255)
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                         
CGGGGGTATCAACGACTACAAAAGCGTGGCTCACACTGTGCTTCCTGTCTGGACATGCATGTGATCCATCTTGCCTGCCTTCTTGGTTAAATACACCCCCATTGATCGGTGTTGGGTTCATTCGCGGGCAAGCCCGCTGCTACAGGGGCCAGGCAGGCGTAGCCCTTGTGACCAATGCCATCACATTTACACCTCGCGGCAGCGCCCCGTACACCCGGCCACCACCGGCCAAGCGGCTGCCGATAAACGCATCACTGACGTCTGCATTCCCGGCCTCCAGCAGCAGCTTGGCCTGCAACGCCAGGGCAATATCCTCGGTCAGTTGCCGCGCGCGGTACTGCATGTCACCGGTGTCGGCAAACGCCCCCTTGAGGTTGCCGATATGCGCCGCCAGGCGCGGGTCGCCATGCCCGTCACCCAGTTCGACAAACAGTGCATCGAGTACGCCCGGCTCCTTGGA  >  AE015451/5440792‑5441251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.