New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	11722 =	71 (1.030)	7 (0.110)	7/322	NT	10.3%	coding (620/1104 nt)	dnaN	DNA polymerase III subunit beta
	?	AE015451	11752 =	54 (0.830)					coding (650/1104 nt)	dnaN	DNA polymerase III subunit beta

ACCAGCTTCGCCATGGCCCAGCAGGATGTGCGCTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACCGCGGTATTCGCCTGCAGCTGGCAGCCGGTCAACTGAAGAT  >  AE015451/11526‑11980                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                     aCCAGCTTCGCCATGGCCCAGCAGGATGTGCGCTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTCAAGGTATGGTCAGCATCg                                                                                                                                                                                                                                    <  2:677857/229‑1 (MQ=255)         cGCCATGGCCCAGCAGGATGTGCGCTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGt                                                                                                                                                                                                                                   >  1:209475/1‑222 (MQ=255)          tactgttcgttggaaagaatcgctgtacggctgaaggcttcacgcagcgcctggcggtctccgacgaccagcttgtcaccgcctttgggcagtacgcgctcgtagtccgggaatttgccgtccaccagcttggaggtaaaggtgaactcaccagtagtggcgcggatgtgatgctggcccagcacgatgctgaccataccttcaggatcggtcagcaTCGTGCTgg                                                                                                                                                                                                                              <  1:1059390‑M2/9‑1 (MQ=255)                tcgttggaaagaatcgctgtacggctgaaggcttcacgcagcgcctggcggtctccgacgaccagcttgtcaccgcctttgggcagtacgcgctcgtagtccgggaatttgccgtccaccagcttggaggtaaaggtgaactcaccagtagtggcgcggatgtgatgctggcccagcacgatgctgaccataccttcaggatcggtcagcaTCGTGCTGGGCCAGCATCACATCcg                                                                                                                                                                                                              <  1:575745‑M2/25‑1 (MQ=255)                  ccAGCAGGATGTGCGCTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCAt                                                                                                                                                                                                                                      >  2:414645/1‑210 (MQ=255)                  ccAGCAGGATGTGCGCTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCcgcg                                                                                                                                                                                                            >  1:157726/1‑236 (MQ=255)                              gcgcTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGt                                                                                                                                                                                                 >  1:139056/1‑235 (MQ=255)                                       ccTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCcg                                                                                                                                                                                                              <  1:896866/213‑1 (MQ=255)                                        cTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCAcc                                                                                                                                                                                        <  2:387265/234‑1 (MQ=255)                                               gCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATcaca                                                                                                                                                                                                                  >  2:425439/1‑201 (MQ=255)                                               gCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTc                                                                                                                                                                                >  1:1202200/1‑235 (MQ=255)                                                     tgctTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCtg                                                                                                                                                                         >  1:846627/1‑236 (MQ=255)                                                     tgctTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTAACCTTTACCTCCAAGCtg                                                                                                                                                                         >  1:350788/1‑236 (MQ=255)                                                          gAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCa                                                                                                                                                                                                         >  1:816599/1‑199 (MQ=255)                                                          gAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCa                                                                                                                                                                                                         <  2:816596/199‑1 (MQ=255)                                                          gAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGGTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTgg                                                                                                                                                                                                  >  2:468969/1‑206 (MQ=255)                                                            ggTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAg                                                                                                                                                                            >  2:1139645/1‑226 (MQ=255)                                                            ggTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGc                                                                                                                                                                           >  2:1223736/1‑227 (MQ=255)                                                                 cccGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTg                                                                                                                                                                                                                               >  1:541844/1‑170 (MQ=255)                                                                  ccGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAAt                                                                                                                                                            <  1:786963/236‑1 (MQ=255)                                                                    gCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTc                                                                                                                                                          >  1:398502/1‑236 (MQ=255)                                                                               ctcgcTGCCTCCCCCGACGGTCACCGCCTGGCGCGTTGCTCGCTGAGCGCGCCTATCGAGCAGGAGGATCGCCACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGCCCGATCCTGAAGGTATGGTCAGCATCGt                                                                                                                                                                                                                                   <  2:135372/150‑1 (MQ=255)                                                                               cgcgcTGTAGCCGCCGGCGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTg                                                                                                                                                                                                <  1:171109/187‑1 (MQ=255)                                                                                gcgcTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTAc                                                                                                                                                 <  2:398499/233‑1 (MQ=255)                                                                                  gcTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTg                                                                                                                                                                                                   <  2:696496/181‑1 (MQ=255)                                                                                     gTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTgg                                                                                                                                                                                                                              <  2:1162602/151‑1 (MQ=255)                                                                                       aTCCACCGACGGTCACCGCCTGGCGCTTTGTTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCa                                                                                                                                                                                                         >  1:425254/1‑170 (MQ=255)                                                                                        tCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTa                                                                                                                                                  >  2:649884/1‑224 (MQ=255)                                                                                        tCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTAc                                                                                                                                       >  1:592136/1‑235 (MQ=255)                                                                                             cGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGTGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCactact                                                                                                                                                                                                    <  1:118152/169‑1 (MQ=255)                                                                                                  gTCACCGCCTGGCGCTGTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACCCAAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGc                                                                                                                            <  1:302255/236‑1 (MQ=255)                                                                                                   tCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATTCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGa                                                                                                                                                                                               >  1:939238/1‑168 (MQ=255)                                                                                                   tCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCg                                                                                                                           >  1:651800/1‑236 (MQ=255)                                                                                                     aCCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAgcgc                                                                                                                                           <  1:364480/218‑1 (MQ=255)                                                                                                       cGCCTGGCGCTTTGCTCGATGAGCGTGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATcac                                                                                                                                                                                                                   <  2:1074951/144‑1 (MQ=255)                                                                                                           tGGCGCCTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAATGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCg                                                                                                                                                                                                                                    <  2:848765/123‑1 (MQ=255)                                                                                                             gcgcTTTGCTCGATGAGCGGGCCGATCGAGAAGGAGGATCGACACCAGGTCATCGTGCCGAGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACg                                                                                                                                                                  <  2:416654/187‑1 (MQ=255)                                                                                                                      tCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCACAAAGGCGGt                                                                                                                         >  1:77720/1‑219 (MQ=255)                                                                                                                          atttgccgtccaccagcttggaggtaaaggtgaactcaccagtagtggcgcggatgtgatgctggcccagcacgatgctgaccataccttcaggatcggtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCactac                                                                                                                                                                                                     >  1:1229618‑M2/106‑139 (MQ=255)                                                                                                                          atttgccgtccaccagcttggaggtaaaggtgaactcaccagtagtggcgcggatgtgatgctggcccagcacgatgctgaccataccttcaggatcggtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCactac                                                                                                                                                                                                     <  2:1229615‑M2/34‑1 (MQ=255)                                                                                                                                cgcCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTAc                                                                                                                                       >  1:942160/1‑195 (MQ=255)                                                                                                                                   cGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAg                                                                                                                                              >  2:387183/1‑185 (MQ=255)                                                                                                                                    gATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCg                                                                                                                                                                                                                                    <  2:906398/98‑1 (MQ=255)                                                                                                                                              gaggaTCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACg                                                                                                                                                <  2:139056/172‑1 (MQ=255)                                                                                                                                                         ccAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAg                                                                          <  2:739027/231‑1 (MQ=255)                                                                                                                                                           aGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCcg                                                                                                                                                                                                              >  2:517161/1‑97 (MQ=255)                                                                                                                                                           aGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCcg                                                                                                                                                                                                              <  1:517164/97‑1 (MQ=255)                                                                                                                                                           aGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTa                                                                     <  2:1073838/234‑1 (MQ=255)                                                                                                                                                             gTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACGACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGCCggaa                                                                                                                                                               >  2:103152/1‑140 (MQ=255)                                                                                                                                                               cATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGTCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAg                                                                  >  2:664652/1‑233 (MQ=255)                                                                                                                                                                 tCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGc                                                                                <  1:1190284/217‑1 (MQ=255)                                                                                                                                                                   gtagtggcgcggatgtgatgctggcccagcacgaTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAAt                                                                                                                                                            <  2:1229615‑M1/105‑1 (MQ=255)                                                                                                                                                                   gtagtggcgcggatgtgatgctggcccagcacgaTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAAt                                                                                                                                                            >  1:1229618‑M1/35‑139 (MQ=255)                                                                                                                                                                     agtggcgcggatgtgatgctggcccagcacgatgctgaccatcccttcaggatcggtcagcaTCGTGCTGGGCCAGCATCACATc                                                                                                                                                                                                                <  1:288278‑M2/23‑1 (MQ=255)                                                                                                                                                                          gTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCaa                                                     >  1:1206021/1‑235 (MQ=255)                                                                                                                                                                            cggatgtgatgctggcccagcacgaTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGa                                                  <  1:575745‑M1/211‑1 (MQ=255)                                                                                                                                                                            aaaGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAgcgc                                                                                                                                           <  2:1219968/147‑1 (MQ=255)                                                                                                                                                                              gatgtgatgctggcccagcacgaTGCTGACCGATCCTGAAGGGATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCact                                                                                                                                                                                                       <  1:288278‑M1/62‑1 (MQ=255)                                                                                                                                                                                      tGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACcgc                                        >  1:547321/1‑236 (MQ=255)                                                                                                                                                                                      tGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACcg                                         >  1:1243136/1‑235 (MQ=255)                                                                                                                                                                                      tGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTACCAACGaaa                                                >  1:61545/1‑228 (MQ=255)                                                                                                                                                                                            ccagcacgaTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAACAGTa                                            <  1:1059390‑M1/217‑1 (MQ=255)                                                                                                                                                                                              gcgcgcCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCgg                                                                                                        <  2:534660/164‑1 (MQ=255)                                                                                                                                                                                                gcgcCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGa                                                  >  2:1251853/1‑216 (MQ=255)                                                                                                                                                                                                gcgcCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAg                                              <  2:619113/220‑1 (MQ=255)                                                                                                                                                                                                  gcCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTa                                            <  1:745938/220‑1 (MQ=255)                                                                                                                                                                                                             gATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCTGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGaa                                                 >  1:14753/1‑204 (MQ=255)                                                                                                                                                                                                                 cTGAAGGTATGGTCAGCGTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGTTGAGTTCACCTTTGCCTCCAAGCTGGTGGACGGCCACTTCCCGGACTACGAGCGCGTACTGCCCAAAg                                                                                                                              <  1:558331/123‑1 (MQ=255)                                                                                                                                                                                                                   gAAGGTATGGTCAGCATCGGGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAACTGGTGGACGGCAAATCCCCGGCCTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAAc                                                    <  1:442044/195‑1 (MQ=255)                                                                                                                                                                                                                    caggatcggtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGcgcg                                                                                                                                          <  1:400161‑M2/93‑1 (MQ=255)                                                                                                                                                                                                                    caggatcggtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGcgcg                                                                                                                                          >  2:400158‑M2/16‑108 (MQ=255)                                                                                                                                                                                                                    aaGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACCGCGGTATTCGCCTGCAGCTGGCAGCCGGTCaa          <  1:1139648/236‑1 (MQ=255)                                                                                                                                                                                                                           ggtcagcaTCGTGCTGGGCCAGAATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGc                                                                                <  2:262490‑M2/151‑1 (MQ=255)                                                                                                                                                                                                                            gtcatcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAAGTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGa                                                                                   >  2:952637‑M2/8‑155 (MQ=255)                                                                                                                                                                                                                            gtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGAc                                                                                                    >  1:782518‑M2/8‑138 (MQ=255)                                                                                                                                                                                                                            gtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGAc                                                                                                    <  2:782515‑M2/131‑1 (MQ=255)                                                                                                                                                                                                                            gtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCttt                                                         <  1:781754‑M2/174‑1 (MQ=255)                                                                                                                                                                                                                            gtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCttt                                                         >  2:781751‑M2/8‑181 (MQ=255)                                                                                                                                                                                                                            gtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACCGCGGTATTCGCCTGCAGCTGGCAGCCGGTCAacg        >  1:1146567‑M2/8‑229 (MQ=255)                                                                                                                                                                                                                            gtcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACCGCGGTATTCGCCTGCAGCTGGCAGCCGGTCAACTGAAGAt  >  1:735530‑M2/8‑236 (MQ=255)                                                                                                                                                                                                                            gtcagcaTCGTGCTGGGCCAGCACCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGc                                                                                       <  2:308438‑M2/144‑1 (MQ=255)                                                                                                                                                                                                                             tcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGgtcgtc                                                                                                          >  2:178836‑M2/7‑131 (MQ=255)                                                                                                                                                                                                                             tcagcaTCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACCGCGGTATTCGCCTGCAGCTGGCAGCCGGTCAACTGAAg    >  2:795486‑M2/7‑233 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                     ACCAGCTTCGCCATGGCCCAGCAGGATGTGCGCTATTACCTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGCCTGCTGACCGATCCTGAAGGTATGGTCAGCATCGTGCTGGGCCAGCATCACATCCGCGCCACTACTGGTGAGTTCACCTTTACCTCCAAGCTGGTGGACGGCAAATTCCCGGACTACGAGCGCGTACTGCCCAAAGGCGGTGACAAGCTGGTCGTCGGAGACCGCCAGGCGCTGCGTGAAGCCTTCAGCCGTACAGCGATTCTTTCCAACGAAAAGTACCGCGGTATTCGCCTGCAGCTGGCAGCCGGTCAACTGAAGAT  >  AE015451/11526‑11980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.