New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2644844	51 (0.740)	3 (0.050)	3/316	NT	6.0%	coding (2470/2499 nt)	PP_2316	putative ABC transporter, permease protein
	?	AE015451	= 2645004	47 (0.730)					coding (2310/2499 nt)	PP_2316	putative ABC transporter, permease protein

GCTGACTGCCAGGCCTCAAGCCTCGCGCAACACCGCCAGCGGGCTGGCATTCAACGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAACAGCAACACATACTCCACCGCCAGGGTTACCTGCGCGAGAA  >  AE015451/2644800‑2645209                                                                                                                                                                                                             |                                                                                                                                                                                                              gcTGACTGCCAGGCCTCAAGCCTCGCGCAACACCGGCAGCGGGCTGGTATTCAACGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTTAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGACGACATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAACCCGCTGGCACCACCCAGCAGGCCGAACt                                                                                                                                                                                >  1:1212149/1‑236 (MQ=255)                                  cGCCAGCGGGCTGGCATTCAACGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTc                                                                                                                                                                          <  2:906936/209‑1 (MQ=255)                                      aGCGGGCTGGCATTCAACGCCCGCCGTGTCCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGgccgcgccgc                                                                                                                                           <  1:887738/236‑1 (MQ=255)                                          ggCTGGCATTCAACGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGa                                                                                                                                                                                   >  1:819136/1‑192 (MQ=255)                                            ccggCATTCAACGCCCGCCGTGTCCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCcagca                                                                                                                                                                                         <  1:230462/182‑1 (MQ=255)                                               gCATTCAACGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCcgcgccgcgc                                                                                                                                         <  2:394910/229‑1 (MQ=255)                                                   tCAACGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTgc                                                                                                                                  <  1:865665/232‑1 (MQ=255)                                                      aCGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTc                                                                                                                                                                          <  2:441782/189‑1 (MQ=255)                                                                tgtTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGAt                                                                                                                                                                            >  1:1032680/1‑177 (MQ=255)                                                                 gtTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACt                                                                                                                                                                                <  2:850645/172‑1 (MQ=255)                                                                          cccccagcgccACCCACCCGCAGTGCCCCCGTCAGCGGCAGCACCAGCAGCCACGGGTGCGGGCTCCCCTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGc                                                                                                              <  1:325422/228‑1 (MQ=255)                                                                          accccagcaccACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATagcccgctggcggtgttgcgcgaggcttgaggcctggcagtcagcgcttctgccg                                                                                                                                                        >  1:1016190‑M2/1‑132 (MQ=255)                                                                          accccagcaccACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATagcccgctggcggtgttgcgcgaggcttgaggcctggcagtcagcgcttctgccg                                                                                                                                                        <  2:1016187‑M2/187‑56 (MQ=255)                                                                               agcaccACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTgc                                                                                                                                  <  1:1224590/204‑1 (MQ=255)                                                                               agcaccACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGGGCGCGCAACAGTGCCCCTTGGCGaa                                                                                                           >  1:28013/1‑227 (MQ=255)                                                                                    cacccaccAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATagcccg                                                                                                                                                                                                         <  2:116426‑M2/128‑7 (MQ=255)                                                                                         accaGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTc                                                                                                                                                                          <  2:472659/154‑1 (MQ=255)                                                                                         accaGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTc                                                                                                                                                                          >  1:472662/1‑154 (MQ=255)                                                                                         accaGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGc                                                                                                              >  2:1011344/1‑214 (MQ=255)                                                                                         accaGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGc                                                                                                              <  1:1011347/214‑1 (MQ=255)                                                                                         accaGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGc                                                                                        >  1:285955/1‑236 (MQ=255)                                                                                         accaGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGc                                                                                        >  1:617808/1‑236 (MQ=255)                                                                                            agcagTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCt                                                                                      >  1:1224463/1‑235 (MQ=255)                                                                                                 tGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAg                                                                                 <  1:798702/235‑1 (MQ=255)                                                                                                    ccccGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGc                                                                                                                                                         >  1:835331/1‑160 (MQ=255)                                                                                                    ccccGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCTGCGTGGCCTGCAAGcc                                                                               >  1:251813/1‑234 (MQ=255)                                                                                                    ccccGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGcc                                                                               >  2:642237/1‑234 (MQ=255)                                                                                                    ccccGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGAGcccc                                                                                                                   >  1:1014078/1‑198 (MQ=255)                                                                                                      ccGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGt                                                                                           >  1:606421/1‑220 (MQ=255)                                                                                                          cAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCa                                                                                   >  2:1234049/1‑224 (MQ=255)                                                                                                           aGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGcc                                                                               >  1:888913/1‑227 (MQ=255)                                                                                                                     ccAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATagcccgctggcggtgttgcgcgaggcttgaggcctggcagtcagcgcttctgccgggacagcacatgcctcaagctgacgcaagacgggccagtcagtccgtcgagacgccctggccgtaacggatgctgctcacataccaggtcg                                                             <  1:1199260‑M2/235‑147 (MQ=255)                                                                                                                        gcagcCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCt                                                                                                     <  2:1197843/192‑1 (MQ=255)                                                                                                                          agcCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAAt                                                                                                          <  1:306086/185‑1 (MQ=255)                                                                                                                                 ggTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAg                                                 >  1:336562/1‑235 (MQ=255)                                                                                                                                   tGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCAc                                              >  1:104769/1‑236 (MQ=255)                                                                                                                                       ggCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCa                                                  <  1:1153295/228‑1 (MQ=255)                                                                                                                                       ggCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAAc                                          <  1:748397/236‑1 (MQ=255)                                                                                                                                                    aTCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGc                                                                                    >  1:1247910/1‑181 (MQ=255)                                                                                                                                                     tCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAACa                                         <  1:975206/223‑1 (MQ=255)                                                                                                                                                                  ggTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAACAGCAACACATa                               >  1:23468/1‑220 (MQ=255)                                                                                                                                                                    naCAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGt                                                                                                                                    <  1:764753/116‑1 (MQ=255)                                                                                                                                                                                 tAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCa                                               >  2:393718/1‑189 (MQ=255)                                                                                                                                                                                 tAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAACAGCAACACATACTCCACCGCCAGGGTTACCTgcgc       >  1:919343/1‑229 (MQ=255)                                                                                                                                                                                 tAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAACAGCAACACATACTCCACCGCCAGGGTTACCTGCGCGAGaa  >  1:510514/1‑234 (MQ=255)                                                                                                                                                                                 tAATCAGTTCGCACCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCACCAACGGCCGCGCCGCGCCCAg                                                                                                                                     >  2:1105602/1‑103 (MQ=255)                                                                                                                                                                                    ccAGTTCGCAGCCCGCGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAACAGCAACACATACTCCAcc                        <  1:157412/208‑1 (MQ=255)                                                                                                                                                                                      aGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCACGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCCCGAACAGCa                                      >  1:242636/1‑193 (MQ=255)                                                                                                                                                                                             aGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGgccg                                                                                                                                                 >  1:984306/1‑79 (MQ=255)                                                                                                                                                                                             aGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGgccg                                                                                                                                                 <  2:984303/79‑1 (MQ=255)                                                                                                                                                                                               cccACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGc                                                <  2:1033240/174‑1 (MQ=255)                                                                                                                                                                                                            aTAGCCCGCTGCCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTTACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGccc                                                          >  2:938516/1‑151 (MQ=255)                                                                                                                                                                                                             |                                                                                                                                                                                                              GCTGACTGCCAGGCCTCAAGCCTCGCGCAACACCGCCAGCGGGCTGGCATTCAACGCCCGCCGTGTTCCCAGCACCCCAGCACCACCCACCAGCAGTGCCCCCGTCAGCGGCAACACCAGCAGCCACGGGTGCGGGCTCCACTGCAAATCGAAGGCATAGCGGTACAGCACCCAGGTAATCAGTTCGCAGCCCACGGCCGCCAATAGCCCGCTGGCCGCACCCAGCAGGCCGAACTCGATTCGCCGGGCCTTGACCAGCAACGGCCGCGCCGCGCCCAGTGCGCGCAACAGTGCCCCTTGGCGAATGCGCTCATCCAGCGTGGCCTGCAAGCCGGCGAACAGCACTGCCAGCCCGGCGGCCAGCACGAACAGCAACACATACTCCACCGCCAGGGTTACCTGCGCGAGAA  >  AE015451/2644800‑2645209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.