New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1953934 =	28 (0.640)	3 (0.070)	3/328	NT	10.0%	coding (258/1494 nt)	PP_1752	conserved protein of unknown function
	?	AE015451	1953958 =	27 (0.640)					coding (282/1494 nt)	PP_1752	conserved protein of unknown function

TTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAACCAGAACTTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCGTGCACCCGCCCCTGCAGCATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1954168‑1953934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcCTTGCCGCCCAAGGGGCGAATGGGCGTTTTCTTTGGCAACTGGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCT  >  AE015451/1953958‑1954188                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAACCAGAACTTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCGTGCACCCGCCCCTGCAGCATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGGCGGGC                                                                                                                                                                                                                                         <  1:760808/235‑1                                                                         CAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCGTGCACCCGCCCCTGCAGCATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGGCGGGC                                                                                                                                                                                                                                         <  2:703720/163‑1                                                                                                                       ACGGCATCCTTGAACACCCCGTGCACCCGCCCCTGCAGCATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGGCGGGCCTTGCCGC                                                                                                                                                                                                                                 <  2:380291/125‑1                                                                                                                                      cCCCCGTGCACCCGCCCCTGCAGCATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGGCGGGCCTTGCCGCCCAAGGGGCGAATGGGCGTTTTCTTTGGCAACTGGTACAGCCAGATGCTGCAGGG                                                                                                                                                                          <  1:482561/164‑1                                                                                                                                            TGCACCCGCCCCTGCAGCATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGG                                                                                                                                                                                                                                              >  2:126781/1‑91                                                                                                                                              CACCCGCCCCTGCAGCATCGGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGGCGGGC                                                                                                                                                                                                                                         <  2:361652/94‑1                                                                                                                                                             CATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGCCCCGCCAATAGCGCCAGGCGGGCCTTGCCGCCCAAGGGGCGAATGGGCGTTTTCTTTGGCAACTGGT                                                                                                                                                                                             <  2:804216/123‑1                                                                                                                                                                                                                                      GCGGGCCTTGCCGACCAAGGGGCGAATGGGCGTTTTCTTTGGCAACTGGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGG            <  1:483145/227‑1                                                                                                                                                                                                                                         GGCCTTGCCGCCCAAGGGGCGAATGGGCGTTTTCTTTGGCAACTGGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCT  <  2:760806/234‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAACCAGAACTTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCGTGCACCCGCCCCTGCAGCATCTGGCTGTACCAGTTGCCAAAGAAAACGCCCATTCGCCCCTTGGGCGGCAAGGCCCGCCAATAGCGCCAGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1954168‑1953934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcCTTGCCGCCCAAGGGGCGAATGGGCGTTTTCTTTGGCAACTGGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCT  >  AE015451/1953958‑1954188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.