New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 2776095 =35 (0.800)3 (0.070) 3/318 NT 9.3% coding (442/1227 nt) sotB Probable sugar efflux transporter
?AE015451 2776128 = 26 (0.640)coding (475/1227 nt) sotB Probable sugar efflux transporter

CGCTTGAACAGGACCGGCAGGCTGCGCAACGAACCGGAGTTCTGGCTGGGCAGCAGCGGCAGCGATTTGATCAGGCAAAGCATGGTGGCTAGCGCTACCCCGGCAATGCTCAGGAACGTGATACGCCAGCCCAGTGCCTCGCCCACCACACGGCCCAGCGGGATGCCCAGGACCATGGCCAGGGTAGTACCGGTGGCCAGCAGGCCCAGCGCCTTGGCCTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2776321‑2776095
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgctggccACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGG  >  AE015451/2776128‑2776167
                                                                                                                                                                                                                                                                           
CGCTTGAACAGGACCGGCAGGCTGCGCAACGAACCGGACTTCTGGCTGGGCAGCAGCGACAGCGATTTGATCAGGCAAAGCATGGTGGCTAGCGCTACCCCGGCAATGCTCAGGAACGTAATACGCCAGCCCAGTGCCTCGCCCACCACACGGCCCAGCGGGATGCCCAGGACCATGGCCAGGGTAGTACCGGTGGCCAGCTGGCCCAGCGCCTTGGCCTGCT                                              <  2:764640/223‑1
                                                                     agCAGGCAAAGCATGGTGGCTAGCGCTACCCCGGCAATGCTCAGGAACGTGATACGCCAGCCCAGTGCCTCGCCCACCACACGGCCCAGCGGGATGCCCAGGACCATGGCCAGGGTAGTACCGGTGGCCAGCAGGCCCAGCGCCTTGGCCTGCTGGCC                                          <  2:657335/156‑1
                                                                                                   CCGGCAATGCTCAGGAACGTGATACGCCAGCCCAGTGCCTCGCCCACCACACGGCCCAGCGGGATGCCCAGGACCATGGCCAGGGTAGTACCGGTGGCCAGCAGGCCCAGCGCCTTGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGG  <  1:373174/168‑1
                                                                                                   CCGGCAATGCTCAGGAACGTGATACGCCAGCCCAGTGCCTCGCCCACCACACGGCCCAGCGGGATGCCCAGGACCATGGCCAGGGTAGTACCGGTGGCCAGCAGGCCCAGCGCCTTGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGG  >  2:373172/1‑168
                                                                                                                 GAACGTGATACGCCAGCCCAGTGCCTCGCCCACCACACGGCCCAGCGGGATGCCCAGGACCATGGCCAGGGTAGTACCGGTGGCGAGCAGGCCCAGCGCCTTGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGG              <  2:36227/142‑1
                                                                                                                                                                                                                                                                           
CGCTTGAACAGGACCGGCAGGCTGCGCAACGAACCGGAGTTCTGGCTGGGCAGCAGCGGCAGCGATTTGATCAGGCAAAGCATGGTGGCTAGCGCTACCCCGGCAATGCTCAGGAACGTGATACGCCAGCCCAGTGCCTCGCCCACCACACGGCCCAGCGGGATGCCCAGGACCATGGCCAGGGTAGTACCGGTGGCCAGCAGGCCCAGCGCCTTGGCCTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2776321‑2776095
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgctggccACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGG  >  AE015451/2776128‑2776167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.