New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2867848 =	37 (0.850)	3 (0.070)	3/322	NT	8.1%	intergenic (‑1072/‑497)	glllA/PP_2520	gallate dioxygenase/conserved protein of unknown function
	?	AE015451	2867914 =	33 (0.800)					intergenic (‑1138/‑431)	glllA/PP_2520	gallate dioxygenase/conserved protein of unknown function

CATTGCTGCCTACCAGTGGCTGATCCTGGTGCTGTGCTTCCTGATCGTGCTGTTCGATGGCTTCGATGTCGCCGTCATGGGTTTCATCGCGCCTTCGCTGATGCAGGACTGGGGCCTGTCGCGCGCCGCCTTTGGCCCGGTGATGAGTGCCGGCATGGTCGGCCTTGCCATCGGCGCGCTGACCGCCGGCCCGTACGCCGACCGGTTGGGCCGCAAGAAAGTGCTGCTGATCGCGGTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2868089‑2867848 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtcagcgCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACAGCACCAGGATCAGCCACTGGTAGGCAGCAATGGGGCGGTTATCGATCCAGTCTTTGACATCGATGGGGGCATCGACAGGAG  >  AE015451/2867914‑2868138                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATTGCTGCCTACCAGTGGCTGATCCTGGTGCTGTGCTTCCTGATCGTGCTGTTCGATGGCTTCGATGTCGCCGTCATGGGTTTCATCGCGCCTTCGCTGATGCAGGACTGGGGCCTGTCGCGCGCCGCCTTTGGCCCGGTGATGAGTGCCGGCATGGTCGGCCTTGCCATCGGCGCGCTGACCGCCGGCCCGTACGCCGACCGGTTGGGCCGCAAGAAAGTGCTGCTGATCGCG                                                                                                                                                                                                                                          >  1:406282/1‑235                      GATCCTGGTGCTGTGCTTCCTGATCGTGCTGTTCGATGGCTTCGATGTCGCCGTCATGGGTTTCATCGCGCCTTCGCTGATGCAGGACTGGGGCCTGTCGCGCGCCGCCTTTGGCCCGGTGATGAGTGCCGGCATGGTCGGCCTTGCCATCGGCGCGCTGACCGCCGGCCCGTACGCCGACCGGTTGGGCCGCAAGAAAGTGCTGCTGATCG                                                                                                                                                                                                                                            >  2:394558/1‑212                                                                                                                                                                                                       CGACCGGTTGGGCCGCAAGAAAGTGCTGCTGATCGCGGTCAGCCCGCCGATGGCAAGGCC                                                                                                                                                                                                                   <  1:561436/60‑1                                                                                                                                                                                                                      CAAGAAAGTGCTGCTGATCGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGG                                                                                                                                                                     <  1:697902/91‑1                                                                                                                                                                                                                      CAAGAAAGTGCTGCTGATCGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGG                                                                                                                                                                     >  2:697900/1‑91                                                                                                                                                                                                                                           GGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACAGCACCAGGATCAGCCACTGGTAGGCAGCAATGGGGCGGTTATCGATCCAGTCTTTGACATCGATGGGGGCATCGACAGGAG  >  2:416390/1‑233                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATTGCTGCCTACCAGTGGCTGATCCTGGTGCTGTGCTTCCTGATCGTGCTGTTCGATGGCTTCGATGTCGCCGTCATGGGTTTCATCGCGCCTTCGCTGATGCAGGACTGGGGCCTGTCGCGCGCCGCCTTTGGCCCGGTGATGAGTGCCGGCATGGTCGGCCTTGCCATCGGCGCGCTGACCGCCGGCCCGTACGCCGACCGGTTGGGCCGCAAGAAAGTGCTGCTGATCGCGGTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2868089‑2867848 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtcagcgCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACAGCACCAGGATCAGCCACTGGTAGGCAGCAATGGGGCGGTTATCGATCCAGTCTTTGACATCGATGGGGGCATCGACAGGAG  >  AE015451/2867914‑2868138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.