| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2867848 = | 37 (0.850) | 3 (0.070) | 3/322 | NT | 8.1% | intergenic (‑1072/‑497) | glllA/PP_2520 | gallate dioxygenase/conserved protein of unknown function |
| ? | AE015451 | 2867914 = | 33 (0.800) | intergenic (‑1138/‑431) | glllA/PP_2520 | gallate dioxygenase/conserved protein of unknown function | |||||
GAGGTATCAGCCAGGCGGACAGGAAGCCGCCCAGGCCCGAGCCCATGTTGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACAGCACCAGGATCAGCCAC > AE015451/2867620‑2868074 | gaGGTATCAGCCAGGCGGACAGGAAGCCGCCCAGGCCCGAGCCCATGTTGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGAcc > 1:222290/1‑236 (MQ=255) ctcctgtcgatgcccccatcgatgtcaaagactggatcgataaccgccccattgctgcctaccagtggctgatcctggtgctgtgcttcctgatcgtgctgttcgatggcttcgatgtcgccgtcatgggtttcatcgcgccttcgctgatgcaggactggggcctgtcgcgcgccgcctttggcccggtgatgagtgccggcatggtcggccttgccatcggcgCGCTGAcc > 2:416390‑M1/226‑233 (MQ=255) gCCAGGCGGACAGGAAGCCGCCCAGGCCCGAGCCCATGTTGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATcag > 1:791122/1‑235 (MQ=255) aCAGGAAGCCGCCCAGGCCCGAGCCCATGTTGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTc < 1:481049/236‑1 (MQ=255) cAGGAAGCCGCCCAGGCCCGAGCCCATGTTGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTc < 1:30707/235‑1 (MQ=255) ccgccCAGGCCCGAGCCCATGTTGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATca < 1:5410/217‑1 (MQ=255) tGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCcg < 1:479430/236‑1 (MQ=255) gAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCT‑AGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAgcgc < 1:318680/236‑1 (MQ=255) cgagcgGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGAt > 1:252240/1‑222 (MQ=255) gtgGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGAt < 2:634671/149‑1 (MQ=255) aTTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCa > 1:394560/1‑236 (MQ=255) ttCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCcg < 2:222288/181‑1 (MQ=255) gtgCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACtcat < 2:570900/209‑1 (MQ=255) ggCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAgg < 2:338048/228‑1 (MQ=255) cATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCa > 1:329266/1‑231 (MQ=255) ggCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCa > 1:429262/1‑236 (MQ=255) cGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACtcat < 2:791120/192‑1 (MQ=255) aCCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCgg < 1:114220/130‑1 (MQ=255) ccAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCgg > 2:278899/1‑128 (MQ=255) aTGCCGGGGAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCt < 2:16839/83‑1 (MQ=255) ggTCAGCGGCCGTACCACAGCCAGCGCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAggcg < 1:132503/190‑1 (MQ=255) agcagcCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCa > 1:794383/1‑235 (MQ=255) cagcCGTAACACAGCCGGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGc < 2:118055/144‑1 (MQ=255) cctgtcgcgcgccgcctttggcccggtgatgagtgccggcatggtcggccttgccatcggcgCGCTGACCGCGATCAGCAGCACTTTCTTg < 1:697902‑M1/29‑1 (MQ=255) cctgtcgcgcgccgcctttggcccggtgatgagtgccggcatggtcggccttgccatcggcgCGCTGACCGCGATCAGCAGCACTTTCTTg > 2:697900‑M1/63‑91 (MQ=255) acacAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGc > 1:642066/1‑232 (MQ=255) acaGCCAGCGCATAGGGGGTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTGTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCa < 2:29967/135‑1 (MQ=255) agcTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCg > 1:464372/1‑199 (MQ=255) agcTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAgg > 1:560020/1‑203 (MQ=255) cGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGAt > 1:630162/1‑236 (MQ=255) cGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCCGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGGCATCGaa > 1:342450/1‑227 (MQ=255) cGGGCGAAGGCGCAGGCCAGGCTCAGCACGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCCCGCGGCCCAACCgc > 2:67170/1‑77 (MQ=255) gCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGgcgcgag > 1:449226/1‑155 (MQ=255) gCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGcgcgcg < 2:449224/157‑1 (MQ=255) gCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACAt < 2:795365/211‑1 (MQ=255) gCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACAt > 1:795367/1‑211 (MQ=255) gAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCa > 2:751036/1‑227 (MQ=255) ccaggcTCAGCAGGCTTAAACCGCTGACCGCGATCAGCAGCACTTTCCTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACtcat < 2:356669/121‑1 (MQ=255) ggccttgccatcggcgGGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCg < 1:561436‑M1/44‑1 (MQ=255) gcagGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACAGCACCAGGATc < 2:794381/233‑1 (MQ=255) ggCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACACCACCAGGATCAGCCAc > 1:83047/1‑236 (MQ=255) ggCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCAGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACAGCACCAGGATCAGCCAc > 1:451522/1‑236 (MQ=255) | GAGGTATCAGCCAGGCGGACAGGAAGCCGCCCAGGCCCGAGCCCATGTTGAAGCCGGTGAACATGATGGTGATCATCAGCGAGCGGTTGCGTGTGGGCAGGTATTCGGCAAGCAGGGTGGTGCAGTTGGGCATGGCCGCACCCAGGGCAATGCCGGTCAGCAGCCGTAACACAGCCAGCTCATAGGGGTTGCGGGCGAAGGCGCAGGCCAGGCTCAGCAGGCTGAAACCGCTGACCGCGATCAGCAGCACTTTCTTGCGGCCCAACCGGTCGGCGTACGGGCCGGCGGTCAGCGCGCCGATGGCAAGGCCGACCATGCCGGCACTCATCACCGGGCCAAAGGCGGCGCGCGACAGGCCCCAGTCCTGCATCAGCGAAGGCGCGATGAAACCCATGACGGCGACATCGAAGCCATCGAACAGCACGATCAGGAAGCACAGCACCAGGATCAGCCAC > AE015451/2867620‑2868074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |