New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4703277	30 (0.690)	4 (0.100)	4/324	NT	13.0%	coding (183/2055 nt)	kdpB	K+ transporting ATPase, KdpB subunit
	?	AE015451	= 4703801	25 (0.600)					coding (1363/1695 nt)	kdpA	potassium‑transporting ATPase A chain

GGGCGGTCAGGCCCTGGCTGCCGGCCTTGAGGCTGTCGGCGCGGGCCTTGCCACGGCCTTCGGCCAACGCCTCGGCGAAGTTGGCGAACAACACGGTGAACCACAGCCACAGGGCAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4703120‑4703277 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggggcgCATGGTTTCAGCCAGTTGCTGTACGCCTATACCTCGGGCTCGGCCAACAACGGCTCGGCCTTTGCCGGGTTTGGCGCCAACACCGTGTACCACAACCTGATGATCGGCCTGGCCATGCTCATCGGCCGCTTCGGCTACATCCTGCCGATACTGGCGTTGGCCGGCAGCCTGGCGGCGAAAAAAAGCGCGCCGCTGGGGCAGAACAGCTTCCCGACTCACGGCCCGCTGTTCA  <  AE015451/4703801‑4703570                                                                                                                                                                                                                                                                                                                                                                                                        GGGCGGTCAGGCCCTGGCTGCCGGCCTTGAGGCTGTCGGCGCGGGCCTTGCCACGGCCTTCGGCCAACGCCTCGGCGAAGTTGGCGAACAACACGGTGAACCACAGCCACAGGGCAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGG                                                                                                                                                                                                                                               <  2:327161/153‑1                     CCGGCCTGGAGGCTGTCGGCGCGGGCCTTGCCACGGCCTTCGGCCAACGCCTCGGCGAAGTTGGCGAACAACACGGTGAACCACAGCCACAGGGCAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGGGGGCGgcgtgag                                                                                                                                                                                                                                   <  1:223240/145‑8                                                                CCAACGCCTCGGCGAAGTTGGCGAACAACACGGTGAACCACAGCCACAGGGCAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGGGGGCGCATGGTTTCAGCCAGTTG                                                                                                                                                                                                                        >  1:781011/1‑113                                                                CCAACGCCTCGGCGAAGTTGGCGAACAACACGGTGAACCACAGCCACAGGGCAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGGGGGCGCATGGTTTCAGCCAGTTG                                                                                                                                                                                                                        <  2:781009/113‑1                                                                                                                   CAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGGGGGCGCATGGTTTCAGCCAGTTGCTGTACGCCTATACCTCGG                                                                                                                                                                                                     <  1:797718/81‑1                                                                                                                   CAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGGGGGCGCATGGTTTCAGCCAGTTGCTGTACGCCTATACCTCGG                                                                                                                                                                                                     >  2:797716/1‑81                                                                                                                                                           GGCGCATGGTTTCAGCCAGTTGCTGTACGCCTATACCTCGGGCTCGGCCAACAACGGCTCGGCCTTTGCCGGGTTTGGCGCCAACACCGTGTACCACAACCTGATGATCGGCCTGGCCATGCTCATCGGCCGCTTCGGCTACATCCTGCCGATACTGGCGTTGGCCGGCAGCCTGGCGGCGAAAAAAAGCGCGCCGCTGGGGCAGAACAGCTTCCCGACTCACGGCCCGCTGTTCA  >  1:725326/1‑236                                                                                                                                                                                                                                                                                                                                                                                                        GGGCGGTCAGGCCCTGGCTGCCGGCCTTGAGGCTGTCGGCGCGGGCCTTGCCACGGCCTTCGGCCAACGCCTCGGCGAAGTTGGCGAACAACACGGTGAACCACAGCCACAGGGCAATCTGCACCGCAACGCCGATGCTCACGCCGCCGCCGGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4703120‑4703277 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggggcgCATGGTTTCAGCCAGTTGCTGTACGCCTATACCTCGGGCTCGGCCAACAACGGCTCGGCCTTTGCCGGGTTTGGCGCCAACACCGTGTACCACAACCTGATGATCGGCCTGGCCATGCTCATCGGCCGCTTCGGCTACATCCTGCCGATACTGGCGTTGGCCGGCAGCCTGGCGGCGAAAAAAAGCGCGCCGCTGGGGCAGAACAGCTTCCCGACTCACGGCCCGCTGTTCA  <  AE015451/4703801‑4703570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.