New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 4845609 | 33 (0.760) | 3 (0.070) | 3/326 | NT | 8.6% | coding (359/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
? | AE015451 | 4846279 = | 32 (0.770) | coding (1029/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
CAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAACCTTCGTCCGCCACCAGGGTGAGCTGGCCGAAACCACCTTGCTTGTCGAGGGCATCAGCTGCGCCGCCTGCGGCTGGCTGATCGAAAAGCACCTGCGCAACCTGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4845458‑4845609 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccggCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAGCGCGCTGAATGTGGAAGTGGAAGCCCTCGGCCATGACTCACGCTTGTCGGCCATCGTCCGCCTGCTGG > AE015451/4846279‑4846481 CAGGACGAACTGGCCCTGTACGCCCGCAGCGACGTGCAGCAACCCTTCGTCCGCCACCAGGGTGAGCTGGCCGAAACCACCTTGCTTGTCGAGGGCATCAGCTGCGCCGCCTGCGGCTGGCTGATCGAAAAGCACCTGCGCAACCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGA < 1:161832/224‑1 GTCGAGGGCATCAGCTGCGCCGCCTGCGGCTGGCTGATCGAAAAGCACCTGCGCAACCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAGCGCGCTGAATGTGGAAGTGGAAGCCCTCGGCCATGA > 1:286747/1‑236 TGATCGAAAAGCACCTGCGCAACCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAGCGCGCTGAATGTGGAAGTGGAAGCCCTCGGCCATGACTCACGCTTGTCGGCCATCGTCCGCCTGCTGG < 2:286745/234‑1 TGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGCCGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAGCGCGCTGAATGTGGAAGTGGAAGCCCTCGGCCATGACTCACGCTTGTCGGCCATCGTCCGCCTGCTG < 1:210362/209‑1 CGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCT > 2:135994/1‑63 CAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAACCTTCGTCCGCCACCAGGGTGAGCTGGCCGAAACCACCTTGCTTGTCGAGGGCATCAGCTGCGCCGCCTGCGGCTGGCTGATCGAAAAGCACCTGCGCAACCTGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4845458‑4845609 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccggCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAGCGCGCTGAATGTGGAAGTGGAAGCCCTCGGCCATGACTCACGCTTGTCGGCCATCGTCCGCCTGCTGG > AE015451/4846279‑4846481 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |