New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 5813390 = | 33 (0.760) | 3 (0.070) | 3/324 | NT | 10.3% | coding (311/1737 nt) | argS | arginyl‑tRNA synthetase |
? | AE015451 | 5813490 = | 21 (0.510) | coding (411/1737 nt) | argS | arginyl‑tRNA synthetase |
GCCGACGTGGTTCTGGCGGATGACGTTGTCGCCCAGGAACTCCAGCACGCGCGCAACGCTGTCACCGATGATGGTCGAGCGCAGGTGGCCGACGTGCATTTCCTTGGCCAGGTTGGGTGCCGACATGTCGATCACCACCTTTTGCGCCGGGCCGGCTTTGCGCGCACCCAGGTGGGCGTCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5813574‑5813390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcggccaCCTGCGCTCGACCATCATCGGTGACAGCGTTGCGCGCGTGCTGGAGTTCCTGGGCGACAACGTCATCCGCCAGAACCACGTCGGCGACTGGGGTACCCAGTTCGGCATGCTGATGGCCTACCTGCAGGAAAACCCGATCACCAGCGAC > AE015451/5813490‑5813637 GCCGACGTGGTTCTGGCGGATGACGTTGTCGCCCAGGAACTCCAGCACGCGCGCAACGCTGTCACCGATGATGGTCGAGCGCAGGTGGCCGACGTGCATTTCCTTGGCCAGGTTGGGTGCCGACATGTCGATCACCACCTTTTGCGCCGGGCCGGCTTTGCGCGCACCCAGGTGGGCGTCGGCCACCT < 1:245742/188‑1 GCCGACGTGGTTCTGGCGGATGACGTTGTCGCCCAGGAACTCCAGCACGCGCGCAACGCTGTCACCGATGATGGTCGAGCGCAGGTGGCCGACGTGCATTTCCTTGGCCAGGTTGGGTGCCGACATGTCGATCACCACCTTTTGCGCCGGGCCGGCTTTGCGCGCACCCAGGTGGGCGTCGGCCA < 1:541914/185‑1 ACGTGCATTTCCTTGGCCATGTTGTGTGGCGACATGTCGATCACCACCTTTTGCGCCGGGCAGGCTTTGCGCGCACGCAGGTGGGCGTCGGCTACCTGCGCTCGACCATCATCGGTGACAGCGTTGC < 2:449709/127‑1 CGTGCATTTCCTTGGCCGGGTTGGGTGCCGACATGTCGATCACCGCCTTTTGCGCCGGGCCGGCTTTGCGCGCACCCAGGTGGGCGTCGGCCACCTGCGCTCGACCATCATCGGTGACAGCGTTG < 1:158293/125‑1 GCGCGCACCCGGGTGGGCGTCTGCCTCCTGCGCTCGACCATCATCGGTGACAGCGTTGCGCGCGTGCTGGAGTTCCTGGGCGACAACGTCATCCGCCAGA < 1:96856/100‑1 ggCGGCCACCTGCGCTCGACCATCATCGGTGACAGCGTTGCGCGCGTGCTGGAGTTCCTGGGCGACAACGTCATCCGCCAGAACCACGTCGGCGACTGGGGTACCCA < 2:98699/105‑1 TCGGCCACCTGCGCTCGACCATCATCGGTGACAGCGTTGCGCGCGTGCTGGAGTTCCTGGGCGACAACGTCATCCGCCAGAACCACGTCGGCGACTGGGGTACCCAGTTCGGCATGCTGATGGCCTACCTGCAGGAAAACCCGATCACCAGCGAC < 1:136249/155‑1 GCCGACGTGGTTCTGGCGGATGACGTTGTCGCCCAGGAACTCCAGCACGCGCGCAACGCTGTCACCGATGATGGTCGAGCGCAGGTGGCCGACGTGCATTTCCTTGGCCAGGTTGGGTGCCGACATGTCGATCACCACCTTTTGCGCCGGGCCGGCTTTGCGCGCACCCAGGTGGGCGTCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5813574‑5813390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcggccaCCTGCGCTCGACCATCATCGGTGACAGCGTTGCGCGCGTGCTGGAGTTCCTGGGCGACAACGTCATCCGCCAGAACCACGTCGGCGACTGGGGTACCCAGTTCGGCATGCTGATGGCCTACCTGCAGGAAAACCCGATCACCAGCGAC > AE015451/5813490‑5813637 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |