New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 229741	29 (0.660)	3 (0.070)	3/328	NT	9.6%	coding (274/876 nt)	PP_0178	putative efflux pump
	?	AE015451	= 229745	29 (0.690)					coding (278/876 nt)	PP_0178	putative efflux pump

GGTAGTGACCTTCGCCGCCGTGCTCGTGTGGCAGATGGTGGTCTACTACATGTTTGCCCCCTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCGGTGGTGCGCAGCCCGGTAGACGGCTACCTCAACGACCGCGCGC  >  AE015451/229515‑229972                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                        ggTAGTGACCTTCGCCGCCGTGCTCGTGTGGCAGATGGTGGTCTACTACATGTTTGCCCCCTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACccttg                                                                                                                                                                                                                                <  1:22979‑M2/236‑6 (MQ=255) ggTAGTGACCTTCGCCGCCGTGCTCGTGTGGCAGATGGTGGTCTACTACATGTTTGCCCCCTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACccttg                                                                                                                                                                                                                                <  1:232103‑M2/236‑6 (MQ=255)                           tgtgGCAGATGGTGGTCTACTACATGTTTGCCCCCTGGACCCGAGCCGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGgag                                                                                                                                                                                                                  <  2:134985/224‑1 (MQ=255)                                  gATGGTGGTCTACTACATGTTTGCCCCCTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTcc                                                                                                                                                                                                >  1:124447/1‑235 (MQ=255)                                        ggtCTACTACATGTTTGCCCCCTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGaa                                                                                                                                                                                          >  1:753317/1‑235 (MQ=255)                                                 cATGTTTGCCCCCTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAgcgcagcgca                                                                                                                                                                                >  1:628113/1‑236 (MQ=255)                                                         cccccTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGCAGCGCAGCGCAACCGc                                                                                                                                                                           >  1:268930/1‑233 (MQ=255)                                                           cccTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCt                                                                                                                                                                      >  2:748260/1‑236 (MQ=255)                                                           cccTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCt                                                                                                                                                                      >  1:804872/1‑236 (MQ=255)                                                            ccTGGCCCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTg                                                                                                                                                                     <  1:365526/236‑1 (MQ=255)                                                                            ccATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACccttggc                                                                                                                                                                                                                              >  2:22979‑M2/1‑156 (MQ=255)                                                                                         gACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACccttgg                                                                                                                                                                                                                               <  1:342988‑M2/149‑7 (MQ=255)                                                                                                  cAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGcc                                                                                                                                <  1:57107/235‑1 (MQ=255)                                                                                                            ccGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAg                                                                                                                     >  1:615235/1‑236 (MQ=255)                                                                                                                      gggATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGgcccgtgccc                                                                                                           <  1:21677/236‑1 (MQ=255)                                                                                                                             aTCCAGAAGGTCGCGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGgcc                                                                                                                  <  1:353182/222‑1 (MQ=255)                                                                                                                                           ggTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcg                                                                                                                                                                          <  2:474997‑M2/152‑60 (MQ=255)                                                                                                                                           ggTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcg                                                                                                                                                                          >  1:474999‑M2/1‑93 (MQ=255)                                                                                                                                            gTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGgcgc                                                                                      <  1:404809/235‑1 (MQ=255)                                                                                                                                                    cAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGc                                                                               <  2:628111/234‑1 (MQ=255)                                                                                                                                                                        gCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACccttggcgagcgccagggtgaagcggtcctggtcgatggtgaaca                                                                                                                                                                                        >  2:560313‑M2/1‑64 (MQ=255)                                                                                                                                                                         cGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGgttgccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcgccacgtttgacggtctggttgtcgcgcacc                                                                                                                                            <  2:474997‑M1/152‑94 (MQ=255)                                                                                                                                                                         cGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGgttgccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcgccacgtttgacggtctggttgtcgcgcacc                                                                                                                                            >  1:474999‑M1/1‑59 (MQ=255)                                                                                                                                                                            cGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAg                                                               >  1:94603/1‑226 (MQ=255)                                                                                                                                                                                 tGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCATCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGCAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGGCAGCGAGGCGCAAGCGGcggac                                                                           >  2:223950/1‑205 (MQ=255)                                                                                                                                                                                 tGTTCACCATCGACCAGGACCGCTTCACCCTGGC‑‑‑GC‑TC‑‑GCCAAGGgttgccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcgc                                                                                                                                                                         >  2:560313‑M1/1‑45 (MQ=255)                                                                                                                                                                                  gTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACt                                                                     <  2:753315/214‑1 (MQ=255)                                                                                                                                                                                       ccATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCaa                                                                                    <  2:804870/194‑1 (MQ=255)                                                                                                                                                                                              ccAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCGGTGGTGCGCa                                   >  1:574616/1‑236 (MQ=255)                                                                                                                                                                                               cAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCGGTGGTGCGCAg                                  <  1:318484/236‑1 (MQ=255)                                                                                                                                                                                                       ctacACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAAGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCACGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGc                                                                               <  1:255674/180‑1 (MQ=255)                                                                                                                                                                                                          cACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCg                                                                          >  1:49165/1‑185 (MQ=255)                                                                                                                                                                                                           ccccTGGCCCTGCTTCAAGCCAAGGCAACCCTGGGCGAGCGCCAGGAGACCCTgg                                                                                                                                                                                                           <  2:172406/54‑1 (MQ=255)                                                                                                                                                                                                           aCCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTg                                                                             >  1:42733/1‑181 (MQ=255)                                                                                                                                                                                                           aCCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCGGTGGTGCGCAGCCCGGTAGACg                       <  1:748262/235‑1 (MQ=255)                                                                                                                                                                                                                  cccTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGCAGCGCAGCGCAACCGCac                                                                                                                                                                         >  2:96656/1‑81 (MQ=255)                                                                                                                                                                                                                    cTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCggtgg                                         >  2:388629/1‑208 (MQ=255)                                                                                                                                                                                                                          cAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCGGTGGTgcg                                     >  1:682555/1‑206 (MQ=255)                                                                                                                                                                                                                          cAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCGGTGGTGCGCAGCCCGGTAGACGGCTACCTCAACGAcc        <  1:45063/235‑1 (MQ=255)                                                                                                                                                                                                                             gCCAAGGgttgccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcgccacgtttgacggtctggttgtcgcgcacctcgaccttctggatcaatcccgacacatcgggggcgatctggatcacgtcagcgcggatatgg                                                                             >  2:22979‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                              ccAAGGgttgccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcgccacgtttgacggtctggttgtcgcgcacctcgaccttctggatcaatcccgacacatcgggggcgatctggatcacgtc                                                                                          <  1:342988‑M1/149‑144 (MQ=255)                                                                                                                                                                                                                               cAAGGgttgccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcgccacgtttgacggtctggttgtcgcgcacctcgaccttctggatcaatcccgacacatcgggggcgatctggatcacgtcagcgcggatatggccgtctcgggtccagggggcaaacatgtagtagaccaccatctgccacacgagcacggcggcgaaggtcactacc  <  1:232103‑M1/236‑232 (MQ=255)                                                                                                                                                                                                                               cAAGGgttgccttggcttgacgcagggccagggtgaagcggtcctggtcgatggtgaacagcacgtcgccacgtttgacggtctggttgtcgcgcacctcgaccttctggatcaatcccgacacatcgggggcgatctggatcacgtcagcgcggatatggccgtctcgggtccagggggcaaacatgtagtagaccaccatctgccacacgagcacggcggcgaaggtcactacc  <  1:22979‑M1/236‑232 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                        GGTAGTGACCTTCGCCGCCGTGCTCGTGTGGCAGATGGTGGTCTACTACATGTTTGCCCCCTGGACCCGAGACGGCCATATCCGCGCTGACGTGATCCAGATCGCCCCCGATGTGTCGGGATTGATCCAGAAGGTCGAGGTGCGCGACAACCAGACCGTCAAACGTGGCGACGTGCTGTTCACCATCGACCAGGACCGCTTCACCCTGGCCCTGCGTCAAGCCAAGGCAACCCTTGGCGAGCGCCAGGAGACCCTGGCCCAGGCTTCCCGCGAAGCGCAGCGCAACCGCAAGCTGGGCAACCTGGTGGCCGCCGAGCAACTGGAAGAAAGCCAGTCCCGCGAGGCCCGTGCCCGTTCGGCTGTCAGCGAGGCGCAAGTGGCTGTCGATACTGCCCAGCTCAACCTTGACCGCTCGGTGGTGCGCAGCCCGGTAGACGGCTACCTCAACGACCGCGCGC  >  AE015451/229515‑229972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.