New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3550927	29 (0.660)	5 (0.120)	5/324	NT	14.8%	coding (79/957 nt)	PP_3135	putative Glycosyl transferase
	?	AE015451	= 3550994	30 (0.730)					coding (146/957 nt)	PP_3135	putative Glycosyl transferase

CCGAACAGTTGATCAAGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATACCGATGCCTTCGTTGCCGCCGACTCGCTGCAAAAAAC  >  AE015451/3550702‑3551156                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                      ccGAACAGTTGATCAAGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGa                                                                                                                                                                                                                             >  1:291851/1‑236 (MQ=255)               aaGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCt                                                                                                                                                                                                                 <  1:680196/234‑1 (MQ=255)               aaGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTg                                                                                                                                                                                                                >  1:486936/1‑235 (MQ=255)                             aCGTTGCGAAGCCTCCCCATGGATCGATCTGGCGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACagcgagcg                                                                                                                                                                                                                    <  1:251445/217‑1 (MQ=255)                                              cATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACCGGTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTAc                                                                                                                                                                                                       >  2:354755/1‑214 (MQ=255)                                              cATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGC                                                                                                                                                                                                                                       >  1:717507‑M1/1‑181 (MQ=255)                                                    tcgatcTGGTGGAGCAGCGCAACGGTGCCTACGTCCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATg                                                                                                                                                                           <  1:270795/235‑1 (MQ=255)                                                      gatcTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATg                                                                                                                                                                           <  2:291849/233‑1 (MQ=255)                                                         cTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTcgcgcg                                                                                                                                                                              >  1:129233/1‑227 (MQ=255)                                                                 gcagcGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTgcagc                                                                                                                                                               >  2:748875‑M2/1‑229 (MQ=255)                                                                       cAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTGCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGtt                                                                                                                                                                                                         <  2:15416/186‑1 (MQ=255)                                                                                       ccGGAAGTGGAACCGGTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAg                                                                                                                                        <  1:354757/236‑1 (MQ=255)                                                                                                                gcgcAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTgcagcgcatcgaacatcggctgcaacagtccagcggtattgaagttgaccacc                                                                                                               >  1:583928‑M2/1‑183 (MQ=255)                                                                                                                  gcAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAAc                                                                                                             >  1:368664/1‑236 (MQ=255)                                                                                                                    aaaGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGcaa                                                                                                                       >  1:112035/1‑224 (MQ=255)                                                                                                                          gTCAGTATGTCTGCGGGGACAGCTGAAATGGCGAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGt                                                                                                                                                                    <  1:429/173‑1 (MQ=255)                                                                                                                                     ttcGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCa                                                                                                                 >  1:715769/1‑213 (MQ=255)                                                                                                                                          ggACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCca                                                                                          >  1:459155/1‑231 (MQ=255)                                                                                                                                                  gAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTgcagc                                                                                                                                                               >  2:225913‑M2/1‑149 (MQ=255)                                                                                                                                                  gAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTgcagc                                                                                                                                                               <  1:225915‑M2/154‑6 (MQ=255)                                                                                                                                                        gCTAGCAACCCTGTGGATGTCTTGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCggg                                                                                             <  2:504839/214‑1 (MQ=255)                                                                                                                                                           aGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCtggtg                                                                                                                                                                                                 >  2:213715/1‑111 (MQ=255)                                                                                                                                                               aaCCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCaa                                                                 <  1:798952/235‑1 (MQ=255)                                                                                                                                                                        aTGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGcc                                                                                                >  1:657170/1‑195 (MQ=255)                                                                                                                                                                        aTGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCAc                                                                      <  2:790794/221‑1 (MQ=255)                                                                                                                                                                        aTGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCAc                                                                      >  1:790796/1‑221 (MQ=255)                                                                                                                                                                           tCATGGTGGGCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgc                                                                                                                                                                                <  2:483946‑M1/112‑56 (MQ=255)                                                                                                                                                                               ggtggtCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgctgtcggcccggcgcagcgcatcgaacatcggctgcaacagtccagcggtattgaagttgaccaccatgacatccacaggtttgctagccatttcagctgtccccgaagaaatactgacgtctttgcgc                                                >  1:583928‑M1/1‑53 (MQ=255)                                                                                                                                                                                      aaCTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCa                                          >  1:361024/1‑235 (MQ=255)                                                                                                                                                                                         ttCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATa                                       <  1:698816/235‑1 (MQ=255)                                                                                                                                                                                              tACCGCTGGACTATTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAggg                                                              <  1:500981/207‑1 (MQ=255)                                                                                                                                                                                                ccGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgctgtcg                                                                                                                                                                           >  1:109624‑M1/1‑36 (MQ=255)                                                                                                                                                                                                ccGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgctgtcg                                                                                                                                                                           <  2:109623‑M1/96‑61 (MQ=255)                                                                                                                                                                                                      gACTGTTGCAGCCGATGTTCGATGCGCTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgctgtcggcccggcgcagcg                                                                                                                                                              >  2:449632‑M1/1‑30 (MQ=255)                                                                                                                                                                                                       aCTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGcc                                                    <  1:153201/208‑1 (MQ=255)                                                                                                                                                                                                            tGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGcc                                                    <  2:453858/203‑1 (MQ=255)                                                                                                                                                                                                              cAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATACCGATGCCTTCg                           >  2:556205/1‑226 (MQ=255)                                                                                                                                                                                                              cAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATACCGATGCCTTCGTTGCCGCCGa                 >  1:299889/1‑236 (MQ=255)                                                                                                                                                                                                                              cgctgcgcCGGGCCGACagcg                                                                                                                                                                                                                        >  2:656612/1‑21 (MQ=255)                                                                                                                                                                                                                              cgctgcgcCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTgcagcgcatcgaacatcggctgcaacagtc                                                                                                                                      >  2:449632‑M2/1‑73 (MQ=255)                                                                                                                                                                                                                               gcTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgctgtcggcccggcgcagcgcatcgaacatcggctgcaacagtccagcggtattgaagttgaccaccatgacatccacaggtttgctagccatttcagctgtccccgaagaaatactgacgtctttgcgccatcagtaacggttccacttccgggtcgtaggcaccgttgcgctgc  >  2:748875‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                               gcTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgctgtcggcccggcgcagcgcatcgaacatcggctgcaacagtccagcggtattgaagttgaccaccatgacatccacaggtttgctagccatttc                                                                                  >  2:225913‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                               gcTGCaccgagtcatcgcgcgaggcattgtcgaccaccaggtaactggccagccgctcgctgtcggcccggcgcagcgcatcgaacatcggctgcaacagtccagcggtattgaagttgaccaccatgacatccacaggtttgctagccatttc                                                                                  <  1:225915‑M1/154‑150 (MQ=255)                                                                                                                                                                                                                                  gcgcCGGGCCGACAGCGAGCGGCTGGCCAGTTACCtg                                                                                                                                                                                                    >  1:310922/1‑37 (MQ=255)                                                                                                                                                                                                                                  gcgcCGGGCCGACAGCGAGCGGCTGGCCAGTTACCtg                                                                                                                                                                                                    <  2:310920/37‑1 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                      CCGAACAGTTGATCAAGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACC‑GTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCGCCGGGCCGACAGCGAGCGGCTGGCCAGTTACCTGGTGGTCGACAATGCCTCGCGCGATGACTCGGTGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATACCGATGCCTTCGTTGCCGCCGACTCGCTGCAAAAAAC  >  AE015451/3550702‑3551156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.