New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4634373 =	37 (0.850)	6 (0.150)	4/324	NT	14.5%	coding (738/1824 nt)	uvrC	UvrABC system protein C
	?	AE015451	4634457 =	36 (0.870)					coding (654/1824 nt)	uvrC	UvrABC system protein C

CTTCGTGAACAACATTGACGATCAACTCGCCGGGTAGCTCGCGCTCTGCGTTGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTA  >  AE015451/4634144‑4634606                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          cagcctgctgcaaaaggctttttctgtgcgtcagtgcgaagacagctactacgccaaccgcacccggccatgcctgcaataccagataaaacgctgcaaagggccctgcaccgacctggtgactgccgaggaatacgcagaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTc                                                                                                                                                                                                                                      <  1:433103‑M1/6‑1 (MQ=255)  ttCGTGAACAACATTGACGATCAACTCGCCGGGTAGCTCGCGCTCTGCGTTGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGa                                                                                                                                                                                                                                    <  1:407356/236‑1 (MQ=255)           caataggctttttctgtgcgtcagtgcgaagacagctactacgccaaccgcacccggccatgcctgcagtaccagataaaacgctgcaaagggccctgcaccgacctggtgactgccgaggaatacgcagaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTc                                                                                                                                                                                                                                      <  1:402660‑M1/6‑1 (MQ=255)                          cTCGCCGGGTAGCTCGCGCTCTGCGTTGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACgcgg                                                                                                                                                                                                             >  1:58286/1‑235 (MQ=255)                                          cgcTCTGCGTTGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACt                                                                                                                                                                                                                              >  2:245097/1‑202 (MQ=255)                                            ctctGCGTTGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTgccg                                                                                                                                                                                                                                           <  2:728278/187‑1 (MQ=255)                                                 cGTTGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCTCAGTACTCGCTCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTgccg                                                                                                                                                                                                                                           <  2:447851/182‑1 (MQ=255)                                                    tGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGTCGATGACGTCGACATCGCCGCTTCCGCCCTCGATGTACTGTTTGTCCTGCACGCGGCGca                                                                                                                                                                                                         >  1:241823/1‑213 (MQ=255)                                                         accgcacccggccatgcctgcagtaccagataaaacgctgcaaagggccctgcaccgacctggtgactgccgaggaatacgcagaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccggcatggcccgcgctg                                                                                                                                                                                                                                  <  2:654697‑M1/10‑7 (MQ=255)                                                                aCTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCtttt                                                                                                                                                                      <  1:540309/236‑1 (MQ=255)                                                                aCTGGGACAGGAATGCGGCCATGACCCCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCAcg                                                                                                                                                                                                                <  1:227755/194‑1 (MQ=255)                                                                            aTGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATg                                                                                                                                                                                                                                  >  2:730589/1‑164 (MQ=255)                                                                            aTGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCg                                                                                                                                                                                                 >  2:504757/1‑197 (MQ=255)                                                                            aTGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGGCGACACCGCCGCTGCCGCCCTCGATGTACTGTTGGCCCCGc                                                                                                                                                                                                                   >  2:247800/1‑179 (MQ=255)                                                                                  ccATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCCCACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTgccgc                                                                                                                                                                                                                                          <  1:180883/150‑1 (MQ=255)                                                                                     gataaagcgctgcaaagggccctgcaccgacctggtgactgccgaggaatacgcagaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGc                                                                                                                                                                                                                   >  2:352433‑M1/146‑170 (MQ=255)                                                                                               cACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCa                                                                                                                                       >  2:744205/1‑236 (MQ=255)                                                                                               agcaaagggccctgcaccgacctggtgtctgccgaggaatacgcagaggacgttcgtcattcggtgatgtttcgggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGc                                                                                                                                                                                                                   >  2:71844‑M1/136‑160 (MQ=255)                                                                                                         tcGATGCCCACCTGCGGGAGGAAGGTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCg                                                                                                                                                                                                 <  2:55329/168‑1 (MQ=255)                                                                                                           gATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGa                                                                                                                                                                                                                                    <  1:270514/131‑1 (MQ=255)                                                                                                            aTGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTc                                                                                                                                                                                                                                      <  2:190284/128‑1 (MQ=255)                                                                                                              gCCCACCTGCGGGAGGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTcg                                                                                                                                                                                        <  2:220716/172‑1 (MQ=255)                                                                                                                  aCCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCAtt                                                                                                                    <  1:245099/236‑1 (MQ=255)                                                                                                                     tggtgactgccgaggaatacgcagaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGc                                                                                                                                                                                                                   >  2:802596‑M1/114‑138 (MQ=255)                                                                                                                     tggtgactgccgaggaatacgcagaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGc                                                                                                                                                                                                                   <  1:802598‑M1/25‑1 (MQ=255)                                                                                                                         ggAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAg                                                                                                              <  1:556018/235‑1 (MQ=255)                                                                                                                                  tCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCt                                                                                                     <  1:746896/235‑1 (MQ=255)                                                                                                                                   cTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTAc                                                                                                   <  1:615314/236‑1 (MQ=255)                                                                                                                                    ttGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCt                                                                                                     >  2:709299/1‑233 (MQ=255)                                                                                                                                        tgcCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACg                                                                                                  <  2:750199/232‑1 (MQ=255)                                                                                                                                           agaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCCTCTCGGCGTTCACCTCATTGCCCAGt                                                                                                             <  1:256013‑M1/127‑1 (MQ=255)                                                                                                                                                    gcccgccGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTcc                                                                                           <  2:535602/227‑1 (MQ=255)                                                                                                                                                       cgccgcGCACGCTGGTCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATc                                                                                  <  1:327622/233‑1 (MQ=255)                                                                                                                                                       cgccgcGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAgg                                                                                                                                                                                                   >  2:335666/1‑120 (MQ=255)                                                                                                                                                       cgccgcGCACGCTGATCAGGTGCACACAGGCACCACCCGGGCTGACGAAGGCGGCGATGCCGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCACCAAGGCGATCTgg                                                                                                                                                                                           >  2:176805/1‑128 (MQ=255)                                                                                                                                                            cgcACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGGCTTTTCCATCTCGGCGTTCAACTCATTGCCCAg                                                                                                              <  1:335668/200‑1 (MQ=255)                                                                                                                                                                                 caGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCAtt                                                                                                                    <  1:408220/173‑1 (MQ=255)                                                                                                                                                                                     ccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCtt                                                                                                                                            <  1:714760‑M1/96‑1 (MQ=255)                                                                                                                                                                                       ccaccCGGGTAGACGAAGGCAGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCt                                                                                                     <  1:50050/182‑1 (MQ=255)                                                                                                                                                                                         accCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGGTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAg                                                                                                              <  1:30366/171‑1 (MQ=255)                                                                                                                                                                                          cccGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCAtt                                                                                                                    <  1:730591/164‑1 (MQ=255)                                                                                                                                                                                                         gcggcgATGACGCCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCg                                                                              <  1:137007/187‑1 (MQ=255)                                                                                                                                                                                                             cgATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGt                                            <  2:602132/217‑1 (MQ=255)                                                                                                                                                                                                             cgATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGt                                            >  1:602134/1‑217 (MQ=255)                                                                                                                                                                                                                 gACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCtt                     <  1:564893/236‑1 (MQ=255)                                                                                                                                                                                                                  aCGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCtt                     <  1:598076/235‑1 (MQ=255)                                                                                                                                                                                                                         cATCGCCGCGGCCGCCCTCGATGTACTGTTGGGCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGt                                            <  2:182017/205‑1 (MQ=255)                                                                                                                                                                                                                          aTCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACg                                                                       >  2:225866/1‑177 (MQ=255)                                                                                                                                                                                                                             gccgcTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGtttt          <  1:189331/235‑1 (MQ=255)                                                                                                                                                                                                                                     cgccCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTa  <  1:709301/235‑1 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          CTTCGTGAACAACATTGACGATCAACTCGCCGGGTAGCTCGCGCTCTGCGTTGCCCAGATAGTACTGGGACAGGAATGCGGCCATGACCTCGGCCACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTA  >  AE015451/4634144‑4634606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.