New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4634373 =	37 (0.850)	6 (0.150)	4/324	NT	14.5%	coding (738/1824 nt)	uvrC	UvrABC system protein C
	?	AE015451	4634457 =	36 (0.870)					coding (654/1824 nt)	uvrC	UvrABC system protein C

CACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGTTGGCGTAGTAGCTGTCTTCGCACTGACGCACAGAAAAAGCCTTTTGCAGCAGGCTG  >  AE015451/4634238‑4634685                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     cACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCa                                                                                                                                                                                                                      >  2:744205/1‑236 (MQ=255)                    aCCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCAtt                                                                                                                                                                                                   <  1:245099/236‑1 (MQ=255)                           ggAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAg                                                                                                                                                                                             <  1:556018/235‑1 (MQ=255)                                    tCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCt                                                                                                                                                                                    <  1:746896/235‑1 (MQ=255)                                     cTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTAc                                                                                                                                                                                  <  1:615314/236‑1 (MQ=255)                                      ttGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCt                                                                                                                                                                                    >  2:709299/1‑233 (MQ=255)                                          tgcCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACg                                                                                                                                                                                 <  2:750199/232‑1 (MQ=255)                                             agaggacgttcgtcattcggtgatgtttctggaagggcgtagccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCCTCTCGGCGTTCACCTCATTGCCCAGt                                                                                                                                                                                            <  1:256013‑M1/127‑1 (MQ=255)                                                      gcccgccGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTcc                                                                                                                                                                          <  2:535602/227‑1 (MQ=255)                                                         cgccgcGCACGCTGGTCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATc                                                                                                                                                                 <  1:327622/233‑1 (MQ=255)                                                              cgcACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGGCTTTTCCATCTCGGCGTTCAACTCATTGCCCAg                                                                                                                                                                                             <  1:335668/200‑1 (MQ=255)                                                                                   caGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCAtt                                                                                                                                                                                                   <  1:408220/173‑1 (MQ=255)                                                                                       ccagcaactgggcaatgagttgaacgccgagatggaaaaggccgccatgGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCtt                                                                                                                                                                                                                           <  1:714760‑M1/96‑1 (MQ=255)                                                                                         ccaccCGGGTAGACGAAGGCAGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCt                                                                                                                                                                                    <  1:50050/182‑1 (MQ=255)                                                                                           accCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGGTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAg                                                                                                                                                                                             <  1:30366/171‑1 (MQ=255)                                                                                            cccGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCAtt                                                                                                                                                                                                   <  1:730591/164‑1 (MQ=255)                                                                                             actgggcaatgaggtgaacgccgagagggaaaaggccgccatggccctcgatttcgaaaaagccgccgagctgcgcgaccagatcgccttgttgcgccgcgtgcaggaccaacagtacatcgagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCctct                                                                                                                                            <  1:256013‑M2/91‑1 (MQ=255)                                                                                                           gcggcgATGACGCCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCg                                                                                                                                                             <  1:137007/187‑1 (MQ=255)                                                                                                               cgATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGt                                                                                                                           >  1:602134/1‑217 (MQ=255)                                                                                                               cgATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGt                                                                                                                           <  2:602132/217‑1 (MQ=255)                                                                                                                   gACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCtt                                                                                                    <  1:564893/236‑1 (MQ=255)                                                                                                                    aCGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCtt                                                                                                    <  1:598076/235‑1 (MQ=255)                                                                                                                           cATCGCCGCGGCCGCCCTCGATGTACTGTTGGGCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGt                                                                                                                           <  2:182017/205‑1 (MQ=255)                                                                                                                            aaggccgccatggccctcgatttcgaaaaagccgccgagctgcgcgaccagatcgccttgttgcgccgcgtgcaggaccaacagtacatcgagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTgg                                                                                                                                                                                      <  1:714760‑M2/49‑1 (MQ=255)                                                                                                                            aTCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACg                                                                                                                                                      >  2:225866/1‑177 (MQ=255)                                                                                                                               gccgcTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGtttt                                                                                         <  1:189331/235‑1 (MQ=255)                                                                                                                                       cgccCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTa                                                                                 <  1:709301/235‑1 (MQ=255)                                                                                                                                            TCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCg                                                                                                                 >  2:22580‑M1/1‑198 (MQ=255)                                                                                                                                                  tgcTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGt                                                                                                                           <  2:4076/180‑1 (MQ=255)                                                                                                                                                         ggTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCa                                                                                                                                                                >  1:19470/1‑138 (MQ=255)                                                                                                                                                         ggTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCa                                                                                                                                                                <  2:19470/138‑1 (MQ=255)                                                                                                                                                         ggTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTACAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCct                                                                                                                                              >  1:61030/1‑156 (MQ=255)                                                                                                                                                             cTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCgg                                                           >  2:274399/1‑235 (MQ=255)                                                                                                                                                                  cgcgGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGTTGGCg                                                     >  1:767138/1‑236 (MQ=255)                                                                                                                                                                   gcggcgCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTCCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGTTGGCg                                                     >  1:363831/1‑235 (MQ=255)                                                                                                                                                                    cggcgCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGTTGGCgta                                                   >  1:470956/1‑236 (MQ=255)                                                                                                                                                                        gcAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGCCGAACGTCCTCTGCGTATTCCTCGGCAGt                                                                                                                           >  2:175455/1‑160 (MQ=255)                                                                                                                                                                        gcAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCGGGCTACGCCCTTCCAGAAACATCACCGAATGATGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGtt                                                         >  1:448653/1‑226 (MQ=255)                                                                                                                                                                                       ggTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCCCCAg                                                                                                                     >  2:659690/1‑151 (MQ=255)                                                                                                                                                                                       ggTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTGCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTc                                                                                                                  >  2:589274/1‑154 (MQ=255)                                                                                                                                                                                           gcgcAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAAt                                                                                                                                                          >  2:712475/1‑110 (MQ=255)                                                                                                                                                                                                   gcaggaccaacagtacatcgagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCCGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGACACCAGGTCGGTGCAGGGCCCTTTgct                                                                                                >  2:71844‑M2/26‑159 (MQ=255)                                                                                                                                                                                                   gcaggaccaacagtacatcgagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCa                                                                                                                      <  1:802598‑M2/113‑1 (MQ=255)                                                                                                                                                                                                   gcaggaccaacagtacatcgagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCa                                                                                                                      >  2:802596‑M2/26‑138 (MQ=255)                                                                                                                                                                                                   gcaggaccaacagtacatcgagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGCTTTATc                                                                                      >  2:352433‑M2/26‑170 (MQ=255)                                                                                                                                                                                                                  cagcgcgggcCATGCCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGt                                                          <  2:654697‑M2/173‑1 (MQ=255)                                                                                                                                                                                                                      gagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTATTGCAGGCATGGCCGGGTGCGGTTGGCGTAGTAGCTGTCTTCGCACTGACGCACAGAAAAAGCCTTTTGCAGCAGGCTg  <  1:433103‑M2/229‑1 (MQ=255)                                                                                                                                                                                                                      gagggcCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGTTGGCGTAGTAGCTGTCTTCGCACTGACGCACAGAAAAAGCCTATTg            <  1:402660‑M2/219‑1 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     CACCTCCTCCTCGATGCCCACCTGCGGGAAGAAGTTCTTGCTGCCCAGTACTCGCCCGCCGCGCACGCTGATCAGGTGCACACAGGCACCACCCGGGTTGACGAAGGCGGCGATGACGTCGACATCGCCGCTGCCGCCCTCGATGTACTGTTGGTCCTGCACGCGGCGCAACAAGGCGATCTGGTCGCGCAGCTCGGCGGCTTTTTCGAAATCGAGGGCCATGGCGGCCTTTTCCATCTCGGCGTTCAACTCATTGCCCAGTTGCTGGCTACGCCCTTCCAGAAACATCACCGAATGACGAACGTCCTCTGCGTATTCCTCGGCAGTCACCAGGTCGGTGCAGGGCCCTTTGCAGCGTTTTATCTGGTACTGCAGGCATGGCCGGGTGCGGTTGGCGTAGTAGCTGTCTTCGCACTGACGCACAGAAAAAGCCTTTTGCAGCAGGCTG  >  AE015451/4634238‑4634685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.