New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4861128 =	42 (0.960)	4 (0.110)	4/292	NT	12.0%	intergenic (‑79/+158)	ligA/PP_4275	DNA ligase/putative cell division protein ZipA
	?	AE015451	4861219 =	23 (0.620)					intergenic (‑170/+67)	ligA/PP_4275	DNA ligase/putative cell division protein ZipA

CGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAGTGCTCGATGGTCTGGGCGGT  >  AE015451/4860903‑4861360                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                         cGGGTGTTCAGCTTCCAGCGCCTTGAGCTGGTTGAACAGGCTGTCGTATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCctct                                                                                                                                                                                                                                     <  1:191567/231‑1 (MQ=255)       acgtgatggttgccgcggcacgcaagctggcccacgaactgaacggtgagctcaaggacgaccagcgcagcgtgctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTaa                                                                                                                                                                                                                           >  1:374650‑M1/220‑235 (MQ=255)         gtgatggttgccgcggcacgcaagctggcccacgaactgaacggtgagctcaaggacgaccagcgcagcgtgctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAAc                                                                                                                                                                                                                         >  1:363625‑M1/218‑235 (MQ=255)          tgatggttgccgcggcacgcaagctggcccacgaactgaacggtgagctcaaggacgaccagcgcagcgtgctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCctc                                                                                                                                                                                                                                      >  2:726200‑M1/217‑221 (MQ=255)               gttgccgcggcacgcaagctggcccacgaactgaacggtgagctcaaggacgaccagcgcagcgtgctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTc                                                                                                                                                                                                                   <  1:747560‑M1/24‑1 (MQ=255)                 aGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCg                                                                                                                                                                                                                      >  2:577583/1‑230 (MQ=255)                         gAGCTCGTTGAACAGGCGGTCGTATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCtt                                                                                                                                                                                                                                    >  1:314302/1‑208 (MQ=255)                                            tCGTATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGt                                                                                                                                                                                     <  1:369176/236‑1 (MQ=255)                                             cGTATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGt                                                                                                                                                                                     <  1:692968/235‑1 (MQ=255)                                               tATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGa                                                                                                                                                                                   <  1:577585/235‑1 (MQ=255)                                                  cggtgagctcaaggacgaccagcgcagcgtgctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCgg                                                                                                                                                                                      <  1:595843‑M1/53‑1 (MQ=255)                                                           ggCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCg                                                                                                                                                                                                        >  2:501754/1‑202 (MQ=255)                                                                  gaccagcgcagcgtgctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                                                                                                                  >  2:595841‑M1/161‑233 (MQ=255)                                                                   gggCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGCAAACCCGCTCCcac                                                                                                                                                                                                               >  1:708745/1‑187 (MQ=255)                                                                    ggCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGttt                                                                                                                                                              <  1:51647/235‑1 (MQ=255)                                                                     gCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGGGCGGGGGGTTCCAGGTGTCTGTTGACTGTGCCCGCCTCTTCGCGGGTGAACCCg                                                                                                                                                                                                                      >  2:78813/1‑178 (MQ=255)                                                                        cgtcgAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTCGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTc                                                                                                                                                                                                      <  2:535285/191‑1 (MQ=255)                                                                             aGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                                                                                                        >  1:318719/1‑216 (MQ=255)                                                                               tgctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTcgc                                                                                                                                                                                                                                 >  2:372029‑M1/148‑157 (MQ=255)                                                                                gctgaccgcccagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcggggatcgtcggtgcctgtgccgGCCTCTTCGcgggg                                                                                                                                                                                                                             <  2:222134‑M1/14‑2 (MQ=255)                                                                                       gcccagaccaccgaccacaaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatacagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCct                                                                                                                                                                                                                                       >  1:244009‑M1/140‑143 (MQ=255)                                                                                          cagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAAc                                                                                                                                                                                                                         >  1:499332‑M1/137‑154 (MQ=255)                                                                                          cagaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAAc                                                                                                                                                                                                                         <  2:499330‑M1/18‑1 (MQ=255)                                                                                            gaccatcgagcactaccgccagcgtatcgtcgagttcgagcgccgtgcgctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCgg                                                                                                                                                                                                                               <  2:563996‑M1/12‑1 (MQ=255)                                                                                              aTTGTGCTGATCGTGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAgg                                                                                                                                                                                                           <  1:92376/164‑1 (MQ=255)                                                                                              aTTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGGTGTACCTGTa                                                                                                                                                                         >  1:381446/1‑198 (MQ=255)                                                                                                 gtgCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTcgc                                                                                                                                                                                                                                 >  2:806389/1‑139 (MQ=255)                                                                                                  tgCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAcc                                                                                                                                                                             <  2:91122/190‑1 (MQ=255)                                                                                                   gagcactaccgccagcgtatcgtcgagttcgagcgccgtgccctaacccagaagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggatcgggtatcgtcgttgcctgtgccgGcctctg                                                                                                                                                                                                                                    <  2:374424‑M1/7‑2 (MQ=255)                                                                                                     tGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCcgc                                                                                                                                                        >  1:465252/1‑208 (MQ=255)                                                                                                         cGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGAGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAccga                                                                                                                                 >  1:762899/1‑227 (MQ=255)                                                                                                               cGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCca                                                                                                                                                                                                                >  2:56479/1‑142 (MQ=255)                                                                                                                        gTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACg                                                                                                          <  1:178752/235‑1 (MQ=255)                                                                                                                            gAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTc                                                                                                     <  1:501756/236‑1 (MQ=255)                                                                                                                               gATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCg                                                                                                                        >  2:301417/1‑214 (MQ=255)                                                                                                                                    gggTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                                                                                                        >  2:710500/1‑161 (MQ=255)                                                                                                                                      gTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTccc                                                                                                                                                                                                                 >  1:308545/1‑118 (MQ=255)                                                                                                                                      gTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTccc                                                                                                                                                                                                                 <  2:308543/118‑1 (MQ=255)                                                                                                                                      gTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGt                                                                                                                                                                                                       >  1:448966/1‑128 (MQ=255)                                                                                                                                      gTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGt                                                                                                                                                                                                       <  2:448964/128‑1 (MQ=255)                                                                                                                                                   tGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGAt                                                                                >  2:747558/1‑234 (MQ=255)                                                                                                                                                          tGTCTTCTCTTGCAAAGCAGAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGTTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                                                                                                                  >  2:759772/1‑145 (MQ=255)                                                                                                                                                            tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGGGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAaga                                                                                                                                                   <  2:126690/158‑1 (MQ=255)                                                                                                                                                             cttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCtt                                                                    >  1:194069/1‑236 (MQ=255)                                                                                                                                                                    tGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGtt                                                             >  1:632898/1‑236 (MQ=255)                                                                                                                                                                        aagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAACCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGt                                                                            <  1:87011/217‑1 (MQ=255)                                                                                                                                                                         agcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGTGCGGCGATGTACCt                                                                                                                                                                            >  1:202746/1‑120 (MQ=255)                                                                                                                                                                         agcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCtt                                                                                          >  1:174448/1‑202 (MQ=255)                                                                                                                                                                              aaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAg                                                                                                              >  2:568541/1‑177 (MQ=255)                                                                                                                                                                                        tGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGGAAACCCGCTCCCACAAGGGCGTCACATGCCCGAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGa                                                                                                                                                      >  2:729262/1‑127 (MQ=255)                                                                                                                                                                                               gggCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGTGGGTTTACCCGCGAAGAGGCTGGCACAGTCAac                                                                                                                                   <  2:496553/137‑1 (MQ=255)                                                                                                                                                                                                 tggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAAcc                                                                                                                                                                                                                        <  1:639358‑M1/19‑1 (MQ=255)                                                                                                                                                                                                 tggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAggg                                                                                                                                                                                         >  1:360780‑M1/34‑83 (MQ=255)                                                                                                                                                                                                 tggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAggg                                                                                                                                                                                         <  2:360778‑M1/50‑1 (MQ=255)                                                                                                                                                                                                    tGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGGGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCa                                                                                                               <  1:608852/154‑1 (MQ=255)                                                                                                                                                                                                       gttcgggtatcgtcgttgcctgtgccgGCCCCTTcg                                                                                                                                                                                                                                  <  2:523137‑M1/9‑1 (MQ=255)                                                                                                                                                                                                             aGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAGt                     >  1:295237/1‑235 (MQ=255)                                                                                                                                                                                                                       tGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGa                                                                                                                                                      <  1:221504/96‑1 (MQ=255)                                                                                                                                                                                                                       tGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGa                                                                                                                                                      >  2:221502/1‑96 (MQ=255)                                                                                                                                                                                                                             tgccgGCCTCTTCGCGGGTAAAcc                                                                                                                                                                                                                        <  2:758303‑M1/19‑1 (MQ=255)                                                                                                                                                                                                                                cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAGTGCTCGATGGTCTGGGCGGt  >  1:727087/1‑235 (MQ=255)                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                         CGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGCATCAGGCACGCTGGGCTCGTCGAGCACGTAGTAGCGATAATTGTGCTGATCGAGCTCGGCACGCAGTTCGAGGATACGGGTTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAGTGCTCGATGGTCTGGGCGGT  >  AE015451/4860903‑4861360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.