New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 5633065 = | 35 (0.800) | 5 (0.120) | 5/324 | NT | 12.6% | coding (2595/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
? | AE015451 | 5633212 = | 36 (0.870) | coding (2742/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
GCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGAT > AE015451/5632832‑5633271 | gCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTc > 2:296685/1‑234 (MQ=255) ctcggcagcatcggcaatggcgacttggtagaccgggcggcctttctcgcgcatgccctggatgtgcttctcgatgccggctttggcttcggcatcgatcaccgggccgatgtccacggccaggcggtccgggcagcccaggcggctttcagccatggcgcccttgagcatctcgattacgcggtcggcggagtcttcctgcaagcacagtacgcgcagggccgagcaaCGCTGGc < 1:652329‑M1/7‑1 (MQ=255) cccGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGgcc < 1:296687/236‑1 (MQ=255) aaGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGa > 1:540518/1‑212 (MQ=255) aaGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAAcc < 2:456472/217‑1 (MQ=255) aaGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAAcc > 1:456474/1‑217 (MQ=255) tGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGTCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCg > 1:353636/1‑236 (MQ=255) cgcCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGCGGCCCGCCTGCTCCAGCGCAACGTCGCTGGCCGTCTgg > 1:462075/1‑169 (MQ=255) ctgGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACt < 1:110905/236‑1 (MQ=255) cATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGcc > 1:90152/1‑194 (MQ=255) tCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGGCGTCTGGGCAACCAGGGCCGCCCGATCCCGCt > 1:174548/1‑172 (MQ=255) tCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAAAGCCGCTGGCCGTCTGGACa > 1:3851/1‑150 (MQ=255) cccAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGc < 1:25275/219‑1 (MQ=255) tgcAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAAc > 2:372765/1‑169 (MQ=255) cAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGgtgt < 1:761060/235‑1 (MQ=255) cAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGgtgt < 1:232171/235‑1 (MQ=255) ccGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAggg < 1:109770/131‑1 (MQ=255) tGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCg > 1:392393/1‑236 (MQ=255) ggTGCCGGCCTGGTCGGAGACGCGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGAtcgt < 2:367634/161‑1 (MQ=255) cGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCgg < 1:237804/236‑1 (MQ=255) ggTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTg > 1:392010/1‑235 (MQ=255) ggAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACa > 2:512068/1‑205 (MQ=255) ggAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGcc > 2:542147/1‑214 (MQ=255) aCGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGTCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCg < 2:353634/191‑1 (MQ=255) ttgagcatctcgattacgcggtcggcggagtcttcctgcaagcacagtacgcgcagggccgagcaaCGCTGGCCGTCTGGACAACCAGGGCCGCCCGGTCCCGCTGATCGCCGAAAc < 2:215497‑M1/51‑1 (MQ=255) gcgTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCtt > 1:789027/1‑235 (MQ=255) aaaGGCGTGATGTTCCCCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAgg < 1:239287/235‑1 (MQ=255) tGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCa < 1:401618/193‑1 (MQ=255) aTGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTgcgc < 2:371124/210‑1 (MQ=255) tGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCG‑AACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACg > 1:180800/1‑158 (MQ=255) cGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTc < 1:81591/192‑1 (MQ=255) cACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGCTCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGCCCGAACAGGTCGTGATCGACgt > 2:24643/1‑147 (MQ=255) cACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAg > 2:738204/1‑168 (MQ=255) cTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCga > 1:581054/1‑235 (MQ=255) aaGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGAt > 1:329999/1‑235 (MQ=255) gCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACtgt < 2:514196/193‑1 (MQ=255) cGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACtgt > 2:782528/1‑190 (MQ=255) cGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCg > 2:389914/1‑223 (MQ=255) cagggccgagcaaCGCTGGCCGTCTGGACAACCACGGCCGCCCGATCCCGCTGATCGCCGAAAcc < 2:742048‑M1/52‑1 (MQ=255) gggccgagcaaCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTg < 2:652327‑M1/150‑1 (MQ=255) ccgagcaaCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGAcgc < 2:386567‑M1/114‑2 (MQ=255) gagcaaCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCCCTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAg < 2:704629‑M1/135‑1 (MQ=255) accGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATc < 1:220149/205‑1 (MQ=255) | GCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTCGGTGCCGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGAT > AE015451/5632832‑5633271 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |