New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5633065 =	35 (0.800)	5 (0.120)	5/324	NT	12.6%	coding (2595/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
	?	AE015451	5633212 =	36 (0.870)					coding (2742/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase

CGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATGCGCGAGAAAGGCCGCCCGGTCTACCAAGTCGCCATTGCCGATGCTGCCGAG  >  AE015451/5632984‑5633440                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     cGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCgg                                                                                                                                                                                                                               <  1:237804/236‑1 (MQ=255)       ggTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTg                                                                                                                                                                                                                          >  1:392010/1‑235 (MQ=255)                     gcgTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCtt                                                                                                                                                                                                            >  1:789027/1‑235 (MQ=255)                          aaaGGCGTGATGTTCCCCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAgg                                                                                                                                                                                                       <  1:239287/235‑1 (MQ=255)                                   aTGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTgcgc                                                                                                                                                                                                                       <  2:371124/210‑1 (MQ=255)                                           cGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTc                                                                                                                                                                                                                                 <  1:81591/192‑1 (MQ=255)                                                   cTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCga                                                                                                                                                                              >  1:581054/1‑235 (MQ=255)                                                      aaGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGAt                                                                                                                                                                           >  1:329999/1‑235 (MQ=255)                                                           gCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACtgt                                                                                                                                                                                                                <  2:514196/193‑1 (MQ=255)                                                              cGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACtgt                                                                                                                                                                                                                >  2:782528/1‑190 (MQ=255)                                                              cGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCg                                                                                                                                                                               >  2:389914/1‑223 (MQ=255)                                                                       gggccgagcaaCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTg                                                                                                                                                                                                                                    <  2:652327‑M1/150‑1 (MQ=255)                                                                             accGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATc                                                                                                                                                                                <  1:220149/205‑1 (MQ=255)                                                                               caacgctggccggcactgtcgaaggccgaggacaccacgtcgatcacgacctgttcggtcagtgccgaggagtcgacgatcatcgcgttctggccgccggtttcggcgatcagcgggatcgggcggccctggttgtccagacggccagcgTTGCTCGGccc                                                                                                                                                                                                                            <  2:652327‑M2/11‑1 (MQ=255)                                                                                   GCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAgccgcc                                                                                                                                              >  1:768861‑M1/1‑235 (MQ=255)                                                                                              ctgtcgaaggccgaggacaccacgtcgatcacgacctgttcggtcagggccgaggagtcgacgatcatcgcgttctggccgccggtttcggcgatcagcgggatcgggcggccctggttgtccagacggccagcgTTGCTc                                                                                                                                                                                                                                 <  2:704629‑M2/6‑1 (MQ=255)                                                                                               gACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGGAATCGAGATGCCCAAGGgcgc                                                                                                                                                               >  2:444398/1‑206 (MQ=255)                                                                                                 agccaggggCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGAcc                                                                                                                               <  1:238927/230‑1 (MQ=255)                                                                                                        ggCCGACCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACcg                                                                                                                                                                                       <  1:369015/173‑1 (MQ=255)                                                                                                         gccgccCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGcc                                                                                                                       <  1:503228/236‑1 (MQ=255)                                                                                                                 aTCCCGCTGATCGCCGAAACCGTCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGcgcg                                                                                                                                                                                                                      >  1:274520/1‑133 (MQ=255)                                                                                                                   gcgtcgatcacgacctgttcggtcagtgccgaggagtcgacgatcatcgcgttctggccgccggtttcggcgatcagcgggatcgggcggccctggttgtccagacggccagcgTTGCTCgg                                                                                                                                                                                                                               <  2:386567‑M2/8‑1 (MQ=255)                                                                                                                     cGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGcc                                                                                                                       <  2:392391/224‑1 (MQ=255)                                                                                                                     cGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGCAATCgc                                                                                                                                                                              >  2:238925/1‑168 (MQ=255)                                                                                                                        tGATCGCCGAAACCGGCGGCCAGCACGCGATGATCGTCGACTCCGCGGCACTGACCGACCAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTg                                                                                                                                                       <  2:226413/189‑1 (MQ=255)                                                                                                                        tGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGc                                                                                                           <  2:789025/233‑1 (MQ=255)                                                                                                                          aTCGCCGAAACCGGCGGCCAGAACGCGAGGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGccc                                                                                                                                    <  2:90151/206‑1 (MQ=255)                                                                                                                             gCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTgcg                                                                                                                                                                                                                        <  1:471775/119‑1 (MQ=255)                                                                                                                                            cAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGCCCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCaa                                                                                    <  1:372767/236‑1 (MQ=255)                                                                                                                                            cAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCaa                                                                                    <  1:512070/236‑1 (MQ=255)                                                                                                                                                 cgcgATGATCGTCGCCTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGAcc                                                                                                                               <  2:642108/188‑1 (MQ=255)                                                                                                                                                        atCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCg                                                                         <  1:542149/235‑1 (MQ=255)                                                                                                                                                                             aCCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTCGAc                                                                                                                 >  2:316304/1‑174 (MQ=255)                                                                                                                                                                                gAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCAGCGAGAAGCACATCCAGGGCATGcgcg                                                 >  1:280424/1‑235 (MQ=255)                                                                                                                                                                                 ggtttcggcgatcagcgggatcgggcggccgtggttgtccagacggccagcgTTGCTCGGCCCTg                                                                                                                                                                                                                          <  2:742048‑M2/13‑1 (MQ=255)                                                                                                                                                                                  gtttcggcgatcagcgggaccgggcggccctggttgtccagacggccagcgTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCaa                                                                                                                                                                     <  2:215497‑M2/66‑1 (MQ=255)                                                                                                                                                                                                   tggtgTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATGCGCGAGAAAGgccg                                       <  2:796716/226‑1 (MQ=255)                                                                                                                                                                                                   tggtgTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATGCGCGAGAAAGgccg                                       >  1:796718/1‑226 (MQ=255)                                                                                                                                                                                                   tggtgTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATGCGCGAGAAAGGCCGCCCGGTCTa                              >  2:270650/1‑235 (MQ=255)                                                                                                                                                                                                             ggCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATGCGCGAGAAAGGCCGCCCGGTCTACCAAGTCGCCa                   >  1:415949/1‑236 (MQ=255)                                                                                                                                                                                                              gCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCATGGGCGCCATGGCTGAAAgccg                                                                                                                                                >  2:179570/1‑110 (MQ=255)                                                                                                                                                                                                                cTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCa                                                            >  1:135847/1‑192 (MQ=255)                                                                                                                                                                                                                     aCAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATg                                                     >  2:667212/1‑194 (MQ=255)                                                                                                                                                                                                                              gccagcgTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATGCGCGAGAAAGGCCGCCCGGTCTACCAAGTCGCCATTGCCGATGCTGCCgag  <  1:652329‑M2/229‑1 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     CGGCCTGGTCGGAGACGAGCGCGTCAAAGGCGTGATGTTCACCGGCTCCACTGAAGTGGCCCGCCTGCTGCAGCGCAACGTCGCTGGCCGTCTGGACAACCAGGGCCGCCCGATCCCGCTGATCGCCGAAACCGGCGGCCAGAACGCGATGATCGTCGACTCCTCGGCACTGACCGAACAGGTCGTGATCGACGTGGTGTCCTCGGCCTTCGACAGTGCCGGCCAGCGTTGCTCGGCCCTGCGCGTACTGTGCTTGCAGGAAGACTCCGCCGACCGCGTAATCGAGATGCTCAAGGGCGCCATGGCTGAAAGCCGCCTGGGCTGCCCGGACCGCCTGGCCGTGGACATCGGCCCGGTGATCGATGCCGAAGCCAAAGCCGGCATCGAGAAGCACATCCAGGGCATGCGCGAGAAAGGCCGCCCGGTCTACCAAGTCGCCATTGCCGATGCTGCCGAG  >  AE015451/5632984‑5633440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.