New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 581987345 (1.030)3 (0.070) 3/324 NT 6.6% coding (313/591 nt) PP_5096 putative factor involved in shape determination
?AE015451 = 5819909 42 (1.020)coding (349/591 nt) PP_5096 putative factor involved in shape determination

GCTGCAACTGGTCAAGGCCAACTTCTACAACCCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTGTCATGCCCCCGCTGGC  >  AE015451/5819644‑5820108
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           
gctgcAACTGGTCAAGGCCAACTTCTACAACCCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCCTCa                                                                                                                                                                                                                                       >  1:1326/1‑236 (MQ=255)
    cAACTGGTCAAGGCCAACTTCTCCAACCCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCt                                                                                                                                                                                                                                    <  1:258338/235‑1 (MQ=255)
             aaGGCCAACTTCTACAACCCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCG                                                                                                                                                                                                                                             <  2:386064‑M1/217‑1 (MQ=255)
             aaGGCCAACTTCTACAACCCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCG                                                                                                                                                                                                                                             >  1:386066‑M1/1‑217 (MQ=255)
              aGGCCAACTTCTACAACCCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCt                                                                                                                                                                                                                          >  1:634286/1‑235 (MQ=255)
                               ccGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCGTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGc                                                                                                                                                                                                        >  1:436672‑M2/1‑235 (MQ=255)
                                           ttCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCt                                                                                                                                                                                                                                    <  1:545962/196‑1 (MQ=255)
                                            tCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCg                                                                                                                                                                                                                                  <  2:578690/197‑1 (MQ=255)
                                            tCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCa                                                                                                                                                                                             <  1:346018/234‑1 (MQ=255)
                                                          gcccACCCGCTGCTCAAGCCGATCCGCCGGATCATCCCTGGCGGTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGCTTTTCTGGGTGGCGATGATCGTCATGGTg                                                                                                                                                                                        <  2:634284/224‑1 (MQ=255)
                                                                ccGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTg                                                                                                                                                                        <  1:349904/235‑1 (MQ=255)
                                                                 cGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGGGATCGTTTCCTGGGTTGCa                                                                                                                                                                      >  1:240126/1‑236 (MQ=255)
                                                                                tCCGCCGGATCATCCCTATCGTTGGCGGGCTGGTTACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTTTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTg                                                                                                                                                                                        <  2:446329/203‑1 (MQ=255)
                                                                                   gccgGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGAtttt                                                                                                                                                                                                                 >  1:38813/1‑175 (MQ=255)
                                                                                     cgGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCcgg                                                                                                                                                   <  1:613883/235‑1 (MQ=255)
                                                                                           agcccTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCt                                                                                                                                                                                                                          <  2:222458/156‑1 (MQ=255)
                                                                                              ccTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCGCCTCGCTGTTCCTGAAGATTTTCTGGGTGGcga                                                                                                                                                                                                      >  1:138465‑M2/1‑172 (MQ=255)
                                                                                                          gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcg                                                                                                                                                                                                <  1:722390‑M2/169‑10 (MQ=255)
                                                                                                          gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACGCAACAGACACAACCCGGCGGCCGCACTgg                                                                                                                                       >  1:166777/1‑226 (MQ=255)
                                                                                                          gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGAt                                                                                                                             >  1:143695/1‑236 (MQ=255)
                                                                                                          gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGTCACCTACGGTTCCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGccacccagaaaatcttcaggaacagcgaggtgatgccgatgatcgcccacatcagcagg                                                                                                                                                                                  >  2:757809‑M1/1‑123 (MQ=255)
                                                                                                          gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGAGGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTAGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAGACCGGCGTCCGAACTGGCCTACCAg                                                                                                                               >  2:760587/1‑234 (MQ=255)
                                                                                                                gATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACAGCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGt                                                                                                                                                                                               >  2:346139/1‑164 (MQ=255)
                                                                                                                      tcgtggCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTGTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCGGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTggg                                                                                                                                                                           <  2:234030/178‑1 (MQ=255)
                                                                                                                       cgtcgCTCCGGCGGGCGGGTGTCATCCAGGCCTGGCTGATGGACTTTGGGCTGATGGTCGCCTACGGTACCTTCGGCGCCGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGt                                                                                                                                                                                   <  2:221765/169‑1 (MQ=255)
                                                                                                                        ggcgCTACTGCTGGCGGTGGTCATCCAGGCCTGGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGttt                                                                                                                                                                                 <  2:104078/168‑1 (MQ=255)
                                                                                                                           gCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGt                                                                                                                 >  2:297602/1‑231 (MQ=255)
                                                                                                                                     gCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGTCACCTACGGTTCCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGccacccagaaaatcttcaggaacagcgaggtgatgccgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggtaccgtag                                                                                                                                                       <  1:757811‑M1/182‑87 (MQ=255)
                                                                                                                                                       ttGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATc                                                                                 <  1:613218/235‑1 (MQ=255)
                                                                                                                                                        tGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTccgccg                                                                                               >  1:60676/1‑220 (MQ=255)
                                                                                                                                                        ggCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCCCCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTg                                                                                           <  1:241564/223‑1 (MQ=255)
                                                                                                                                                           tGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGCTCAg                                                                                                                          >  2:4189/1‑190 (MQ=255)
                                                                                                                                                           tGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGt                                                                            >  1:8051/1‑236 (MQ=255)
                                                                                                                                                           tGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTCGCCTAcac                                                                                                                                >  1:729455/1‑182 (MQ=255)
                                                                                                                                                            gATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATg                                                                                                                                                                                           >  2:763511/1‑124 (MQ=255)
                                                                                                                                                                  cTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCgggg                                                                                                                >  2:478633/1‑191 (MQ=255)
                                                                                                                                                                     tgtgCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGccacccagaaaatcttcaggaacagcgaggtgatgccgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggtaccgtaggtgaccatcagcaca                                                                                                                                        >  1:426973‑M1/1‑65 (MQ=255)
                                                                                                                                                                     tgtgCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggtaccgtaggtgaccatcagcaca                                                                                                                                        >  1:426973‑M2/1‑101 (MQ=255)
                                                                                                                                                                          tGATGGTCACCTACGGTACCTTCGGCGCCGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATc                                                                                 <  2:640303/216‑1 (MQ=255)
                                                                                                                                                                                    cTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggaaccgtaggtgacatcagcacaaagcccatcagcaaggcctggatgaccaccgc                                                                                                         <  1:757811‑M2/182‑97 (MQ=255)
                                                                                                                                                                                    cTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCg                                                   >  1:703761/1‑236 (MQ=255)
                                                                                                                                                                                    cTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCG                                                                                                                                                                                                                                             >  2:628907‑M1/1‑50 (MQ=255)
                                                                                                                                                                                              ttCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                         <  1:622382/236‑1 (MQ=255)
                                                                                                                                                                                               tCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTggg                                                                             >  1:590273/1‑199 (MQ=255)
                                                                                                                                                                                                 ggCGACGTCCTGCGCCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGCGCTGGCGCCGTTCCGCAGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGAt                                      >  1:494333/1‑236 (MQ=255)
                                                                                                                                                                                                 ggCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                         <  1:758381/233‑1 (MQ=255)
                                                                                                                                                                                                 ggCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                         >  2:758379/1‑233 (MQ=255)
                                                                                                                                                                                                 ggCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                         >  2:622380/1‑233 (MQ=255)
                                                                                                                                                                                                   cGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCCGGCggt                                      >  1:19306/1‑232 (MQ=255)
                                                                                                                                                                                                       gTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCAGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCATCCTGGCGATCCAgg                                 >  1:759531/1‑235 (MQ=255)
                                                                                                                                                                                                         ccTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCGggtg                               >  1:207013/1‑235 (MQ=255)
                                                                                                                                                                                                          cTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCt                                            >  2:769983/1‑221 (MQ=255)
                                                                                                                                                                                                               ccTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggaaccgtaggtgacatcagcacaaagcccatcagcaaggcctggatgaccaccgccagcagtagcgacgaggtatccagccc                                                                              >  2:757809‑M2/1‑59 (MQ=255)
                                                                                                                                                                                                                     gATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGTACCCAACAGCCACAACCCGGCGGCCGAACTGTCCTACCAGAt                                                                                                                             >  2:435115/1‑129 (MQ=255)
                                                                                                                                                                                                                     gATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCGCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTg                  >  1:560633/1‑236 (MQ=255)
                                                                                                                                                                                                                     gATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGCTTCCTGGGTTGCACCCAACACCcacacc                                                                                                                                                       >  2:728775/1‑101 (MQ=255)
                                                                                                                                                                                                                             cGATCATCGccacccagaaaatcttcaggaacagcgaggtgatgccgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggtaccgtaggtgaccatcagcacaaagcccatcagcaaggcctggatgaccaccgccagcagtagcgacgaggtatccagccc                                                                             <  1:722390‑M1/169‑161 (MQ=255)
                                                                                                                                                                                                                                tcatcGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCGCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCg                      >  1:593233/1‑221 (MQ=255)
                                                                                                                                                                                                                                   tcGccacccagaaaatcttcaggaacagcgaggcgatgccgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggtaccgtaggtgaccatcagcacaaagcccatcagcaaggcctggatgaccaccgccagcagtagcgacgaggtatccagcccgccaacgctagg                                                                 >  1:138465‑M1/1‑3 (MQ=255)
                                                                                                                                                                                                                                   tcGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAg                                  >  2:348112/1‑206 (MQ=255)
                                                                                                                                                                                                                                     gccacccagaaaatcttcaggaacagcgaggtgatgccgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggtaccgtaggtgaccatcagcacaaagcccatcagcaacgcctggatgaccaccgccagcagtagcgacgaggtatccagcccgccaacgctagggatgatccggcggatcggcttgagcagcggttgggtggcacgaacggcgaactggcacagcgg  >  1:436672‑M1/1‑1 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           
GCTGCAACTGGTCAAGGCCAACTTCTACAACCCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTGTCATGCCCCCGCTGGC  >  AE015451/5819644‑5820108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.