New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5819873	45 (1.030)	3 (0.070)	3/324	NT	6.6%	coding (313/591 nt)	PP_5096	putative factor involved in shape determination
	?	AE015451	= 5819909	42 (1.020)					coding (349/591 nt)	PP_5096	putative factor involved in shape determination

CCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTGTCATGCCCCCGCTGGCCGCCTACGCCGGCATGC  >  AE015451/5819675‑5820125                                                                                                                                                                                                                                           |                                                                                                                                                                                                                         ccGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCGTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGc                                                                                                                                                                                                                         >  1:436672‑M2/1‑235 (MQ=255)              tCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCa                                                                                                                                                                                                              <  1:346018/234‑1 (MQ=255)                            gcccACCCGCTGCTCAAGCCGATCCGCCGGATCATCCCTGGCGGTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGCTTTTCTGGGTGGCGATGATCGTCATGGTg                                                                                                                                                                                                         <  2:634284/224‑1 (MQ=255)                                  ccGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTg                                                                                                                                                                                         <  1:349904/235‑1 (MQ=255)                                   cGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGGGATCGTTTCCTGGGTTGCa                                                                                                                                                                                       >  1:240126/1‑236 (MQ=255)                                                  tCCGCCGGATCATCCCTATCGTTGGCGGGCTGGTTACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTTTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTg                                                                                                                                                                                                         <  2:446329/203‑1 (MQ=255)                                                       cgGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCcgg                                                                                                                                                                    <  1:613883/235‑1 (MQ=255)                                                                ccTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCGCCTCGCTGTTCCTGAAGATTTTCTGGGTGGcga                                                                                                                                                                                                                       >  1:138465‑M2/1‑172 (MQ=255)                                                                            gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcg                                                                                                                                                                                                                 <  1:722390‑M2/169‑10 (MQ=255)                                                                            gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACGCAACAGACACAACCCGGCGGCCGCACTgg                                                                                                                                                        >  1:166777/1‑226 (MQ=255)                                                                            gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGAt                                                                                                                                              >  1:143695/1‑236 (MQ=255)                                                                            gggCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGAGGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTAGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAGACCGGCGTCCGAACTGGCCTACCAg                                                                                                                                                >  2:760587/1‑234 (MQ=255)                                                                                  gATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACAGCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGt                                                                                                                                                                                                                >  2:346139/1‑164 (MQ=255)                                                                                        tcgtggCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTGTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCGGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTggg                                                                                                                                                                                            <  2:234030/178‑1 (MQ=255)                                                                                         cgtcgCTCCGGCGGGCGGGTGTCATCCAGGCCTGGCTGATGGACTTTGGGCTGATGGTCGCCTACGGTACCTTCGGCGCCGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGt                                                                                                                                                                                                    <  2:221765/169‑1 (MQ=255)                                                                                          ggcgCTACTGCTGGCGGTGGTCATCCAGGCCTGGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGttt                                                                                                                                                                                                  <  2:104078/168‑1 (MQ=255)                                                                                             gCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGt                                                                                                                                  >  2:297602/1‑231 (MQ=255)                                                                                                                         ttGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATc                                                                                                  <  1:613218/235‑1 (MQ=255)                                                                                                                          tGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTccgccg                                                                                                                >  1:60676/1‑220 (MQ=255)                                                                                                                          ggCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCCCCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTg                                                                                                            <  1:241564/223‑1 (MQ=255)                                                                                                                             tGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGCTCAg                                                                                                                                           >  2:4189/1‑190 (MQ=255)                                                                                                                             tGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGt                                                                                             >  1:8051/1‑236 (MQ=255)                                                                                                                             tGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTCGCCTAcac                                                                                                                                                 >  1:729455/1‑182 (MQ=255)                                                                                                                              gATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATg                                                                                                                                                                                                            >  2:763511/1‑124 (MQ=255)                                                                                                                                    cTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCgggg                                                                                                                                 >  2:478633/1‑191 (MQ=255)                                                                                                                                       tgtgCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggtaccgtaggtgaccatcagcaca                                                                                                                                                         >  1:426973‑M2/1‑101 (MQ=255)                                                                                                                                            tGATGGTCACCTACGGTACCTTCGGCGCCGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATc                                                                                                  <  2:640303/216‑1 (MQ=255)                                                                                                                                                      cTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggaaccgtaggtgacatcagcacaaagcccatcagcaaggcctggatgaccaccgc                                                                                                                          <  1:757811‑M2/182‑97 (MQ=255)                                                                                                                                                      cTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCg                                                                    >  1:703761/1‑236 (MQ=255)                                                                                                                                                                ttCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                                          <  1:622382/236‑1 (MQ=255)                                                                                                                                                                 tCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTggg                                                                                              >  1:590273/1‑199 (MQ=255)                                                                                                                                                                   ggCGACGTCCTGCGCCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGCGCTGGCGCCGTTCCGCAGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGAt                                                       >  1:494333/1‑236 (MQ=255)                                                                                                                                                                   ggCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                                          <  1:758381/233‑1 (MQ=255)                                                                                                                                                                   ggCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                                          >  2:758379/1‑233 (MQ=255)                                                                                                                                                                   ggCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGc                                                          >  2:622380/1‑233 (MQ=255)                                                                                                                                                                     cGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCCGGCggt                                                       >  1:19306/1‑232 (MQ=255)                                                                                                                                                                         gTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCAGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCATCCTGGCGATCCAgg                                                  >  1:759531/1‑235 (MQ=255)                                                                                                                                                                           ccTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCGggtg                                                >  1:207013/1‑235 (MQ=255)                                                                                                                                                                            cTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCt                                                             >  2:769983/1‑221 (MQ=255)                                                                                                                                                                                 ccTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGcgatgatcgcccacatcagcaggtgcaggacgtcgccgaaggaaccgtaggtgacatcagcacaaagcccatcagcaaggcctggatgaccaccgccagcagtagcgacgaggtatccagccc                                                                                               >  2:757809‑M2/1‑59 (MQ=255)                                                                                                                                                                                       gATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGTACCCAACAGCCACAACCCGGCGGCCGAACTGTCCTACCAGAt                                                                                                                                              >  2:435115/1‑129 (MQ=255)                                                                                                                                                                                       gATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCGCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTg                                   >  1:560633/1‑236 (MQ=255)                                                                                                                                                                                       gATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGCTTCCTGGGTTGCACCCAACACCcacacc                                                                                                                                                                        >  2:728775/1‑101 (MQ=255)                                                                                                                                                                                                  tcatcGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCGCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCg                                       >  1:593233/1‑221 (MQ=255)                                                                                                                                                                                                     tcGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAg                                                   >  2:348112/1‑206 (MQ=255)                                                                                                                                                                                                            cACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGt                                                                                                          <  2:1326/144‑1 (MQ=255)                                                                                                                                                                                                                 cGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTGTCATGCCCCCGCTGGCCGCCTACGc          >  1:394031/1‑235 (MQ=255)                                                                                                                                                                                                                      ttCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTGTCATGCCCCCGCTGGCCGCCTACGCCGGCa     >  1:661508/1‑235 (MQ=255)                                                                                                                                                                                                                         cTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTGTCATGCCCCCGCTGGCCGCCTACGCCGGCATGc  >  1:531483/1‑235 (MQ=255)                                                                                                                                                                                                                           gAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGCTCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGt                                         >  2:210264/1‑194 (MQ=255)                                                                                                                                                                                                                            aaGATTTTCTGGGTGGCGATGATCGTCATGGTGAt                                                                                                                                                                                                       <  2:17378/35‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                         CCGCTGTGCCAGTTCGCCGTTCGTGCCACCCAACCGCTGCTCAAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGCCTTCCTGGCGATCCAGGTGGTCCAGTCGTTTGTCATGCCCCCGCTGGCCGCCTACGCCGGCATGC  >  AE015451/5819675‑5820125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.