New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5141269	38 (0.870)	3 (0.070)	3/326	NT	6.6%	coding (293/894 nt)	PP_4525	Transcriptional regulator, LysR family
	?	AE015451	= 5141314	49 (1.180)					coding (248/894 nt)	PP_4525	Transcriptional regulator, LysR family

ATCGCACAGCGGCACGCCATCCAGCCCGGCAAGGCTCGGTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAACCGAGCCCTCCTCGG  >  AE015451/5141082‑5141524                                                                                                                                                                                                                                         |                                                                                                                                                                                                                   aTCGCACAGCGGCACGCCATCCAGCCCGGCAAGGCTCGGTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACgc                                                                                                                                                                                                                  >  1:692823‑M2/1‑233 (MQ=255)  tCGCACAGCGGCACGCCATCCAGCCCGGCAAGGCTCGGTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACgca                                                                                                                                                                                                                 <  1:348192‑M2/235‑4 (MQ=255)               cGCCATCCAGCCCGGCAAGGCTCGGTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCAGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAgc                                                                                                                                                                                                      <  2:492663/233‑1 (MQ=255)                gCCATCCAGCCCGGCAAGGCTCGGTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCt                                                                                                                                                                                                   <  1:411007/235‑1 (MQ=255)                                    tCGGTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACg                                                                                                                                                                                                                   <  1:188925‑M2/199‑2 (MQ=255)                                      ggTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACg                                                                                                                                                                            >  1:285652/1‑236 (MQ=255)                                                            caTCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCAc                                                                                                                                                       <  1:433747/235‑1 (MQ=255)                                                             aTCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCt                                                                                                                                                     <  1:617828/236‑1 (MQ=255)                                                                    gtgtGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGa                                                                                                                                                                                  <  2:502750/200‑1 (MQ=255)                                                                    gtgtGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGa                                                                                                                                                                                  >  1:502752/1‑200 (MQ=255)                                                                          ttCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCCGACATACGGTTGGCATAGTCcag                                                                                                                                                             >  1:377530/1‑215 (MQ=255)                                                                                aGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTg                                                                                                                                  >  1:506896/1‑236 (MQ=255)                                                                                  cccTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAg                                                                                                                                                                  >  2:536842/1‑202 (MQ=255)                                                                                       cAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCAt                                                                                                                                                                    >  2:721097/1‑195 (MQ=255)                                                                                       cAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCg                                                                                                                                         >  2:385906/1‑222 (MQ=255)                                                                                              cTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGAc                                                                                                                       <  2:777125/233‑1 (MQ=255)                                                                                                                       ggCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCATGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGcc                                                                                              >  2:742522/2‑233 (MQ=255)                                                                                                                                 ccTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCctgct                                                                                                                                             <  1:449602/176‑1 (MQ=255)                                                                                                                                 ccTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCctgct                                                                                                                                             >  2:449600/1‑176 (MQ=255)                                                                                                                                   tGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGAc                                                                                                                       <  1:483071/196‑1 (MQ=255)                                                                                                                                   tGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGAc                                                                                                                       >  2:483069/1‑196 (MQ=255)                                                                                                                                   tGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGtt                                                                                                                    >  2:295278/1‑199 (MQ=255)                                                                                                                                               tGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGgc                                                                    <  1:65427/235‑1 (MQ=255)                                                                                                                                                ggTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGAc                                                                                                                       <  1:57740/183‑1 (MQ=255)                                                                                                                                                     tAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGgc                                                                                                                             >  2:388104/1‑172 (MQ=255)                                                                                                                                                     tAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGa                                                             >  1:457505/1‑236 (MQ=255)                                                                                                                                                     tAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGAACGGCGCCCAGCGCAtcgt                                                                                                                                                                                               >  2:334484/1‑106 (MQ=255)                                                                                                                                                          cgcCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGccc                                                                                             <  1:295280/199‑1 (MQ=255)                                                                                                                                                           gcCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGt                                                        >  1:136528/1‑235 (MQ=255)                                                                                                                                                             cAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTg                                                     <  1:420885/236‑1 (MQ=255)                                                                                                                                                                    gCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACgcacggcggcgacccacttgccggcgttgctggcgcgctatcaccagtcttacccgcagg                                                                                                                                                        >  1:643414‑M2/1‑70 (MQ=255)                                                                                                                                                                    gCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACgcacggcggcgacccacttgccggcgttgctggcgcgctatcaccagtcttacccgcagg                                                                                                                                                        <  2:643412‑M2/130‑61 (MQ=255)                                                                                                                                                                    gCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGc                                                <  2:752758/234‑1 (MQ=255)                                                                                                                                                                      cGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGCTCAACGCCCAGCTGctcctc                                                                                  >  1:231805/1‑198 (MQ=255)                                                                                                                                                                             tGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAg                                     <  1:575611/236‑1 (MQ=255)                                                                                                                                                                              gggTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATAc                                                                                                                                                                             >  2:163708/1‑99 (MQ=255)                                                                                                                                                                               ggTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGt                                                                <  1:536844/207‑1 (MQ=255)                                                                                                                                                                                   gcccccGTGCTGTACATGGTCCCCAGCACGAACTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGAc                                                                                                                       <  2:721563/148‑1 (MQ=255)                                                                                                                                                                                                   tGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAAcc               <  1:15813/236‑1 (MQ=255)                                                                                                                                                                                                     gTCCCCAGCCCGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAAcc               <  2:567160/234‑1 (MQ=255)                                                                                                                                                                                                       ccccAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAACCGAGc           >  1:280342/1‑236 (MQ=255)                                                                                                                                                                                                         ccAGCACGAAGTCCCCAGCCGGCTGACCGCCACgcacggcggcgacccacttgccggcgttgctggcgcgctatcaccagtcttacccgcaggtgaacct                                                                                                                                                 >  1:476517‑M2/1‑33 (MQ=255)                                                                                                                                                                                                         ccAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTg                                                               >  1:255288/1‑182 (MQ=255)                                                                                                                                                                                                         ccAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGAGGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGCAACCGAGcc          >  1:175670/1‑235 (MQ=255)                                                                                                                                                                                                            gCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCCGGCGCTGACGTTCGCGCAGGCACAGTTCAACGCCCAGCTGCTCCTCCAGTTGGCGCAGGCGCGTGGACAGGt                                                        >  2:37522/1‑186 (MQ=255)                                                                                                                                                                                                            gCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAACCGAGCcctc       >  1:369885/1‑235 (MQ=255)                                                                                                                                                                                                              aCGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAACCGAGCCctcctc    >  1:714948/1‑236 (MQ=255)                                                                                                                                                                                                                gAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAACCGAGCCCTCCTCgg  <  1:141750/236‑1 (MQ=255)                                                                                                                                                                                                                 aaGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGa                                                    >  2:292618/1‑185 (MQ=255)                                                                                                                                                                                                                  aGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCCCCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCa                                                                                                   <  1:94196/137‑1 (MQ=255)                                                                                                                                                                                                                     ccccAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACAt                                                                                                                                                                               >  2:218567/1‑58 (MQ=255)                                                                                                                                                                                                                     ccccAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGGTGGCGCAGGCGCGTGGAAAGGTTTGATgg                                                 >  1:130442/1‑184 (MQ=255)                                                                                                                                                                                                                          gCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGac                                                            >  1:696141/1‑167 (MQ=255)                                                                                                                                                                                                                                 gACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGAGTAACCGAGCcctc       >  2:477026/1‑214 (MQ=255)                                                                                                                                                                                                                                    cGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTgc                            <  2:136526/190‑1 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                   ATCGCACAGCGGCACGCCATCCAGCCCGGCAAGGCTCGGTGGCCCGTCCACAAGAGCAGCATCCAGGGTGTGGTTCAACAGCCCTTCAAGCAACTCGCCGCTGGGTGCTGCACGCACTTGCAGGTTCACCTGCGGGTAAGACTGGTGATAGCGCGCCAGCAACGCCGGCAAGTGGGTCGCCGCCGTGCTGTACATGGTCCCCAGCACGAAGTCCCCAGCCGGCTGACCGCCACGCACGGCGCCCAGCGCTTCGTCGCGCAAGGCGGACATACGGTTGGCATAGTCCAGCAGCACCTTGCCTGCTGGCGACAGTTGCAGGCGCTGACGTTCGCGCAGGAACAGTTCAACGCCCAGCTGCTCCTCGAGTTGGCGCAGGCGCGTGGAAAGGTTTGATGGCACCCGGTGCAGGCGCTCTGCGGCGCGGGTAACCGAGCCCTCCTCGG  >  AE015451/5141082‑5141524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.