New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	881673 =	23 (0.890)	4 (0.160)	3/300	NT	16.4%	coding (1188/1887 nt)	PP_0765	conserved exported protein of unknown function
	?	AE015451	881743 =	19 (0.780)					coding (1258/1887 nt)	PP_0765	conserved exported protein of unknown function

GTCATCCGGCTGGCACCCATCACCTGGTCGAAGAAATGGGTCAGTGTGGTCTGGAACTGGGTGATCTCCTTACGGCGATACCCATGCAGGTCTTGCCCCGGCGTACCGGTCAGCAGCGATGCGTTGCTCAACGCGCCGCCAATGGGACGGACACCAGCGAACAGGATATCCGTGGTATTGAGCTGCACTGGCGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/881870‑881673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgttgAGCAACGCATCGCTGCTGACCGGTACGCCGGGGCAAGACCTGCATGG  >  AE015451/881743‑881789                                                                                                                                                                                                                                                       GTCATCCGGCTGGCACCCATCACCTGGTCGAAGAAATGGGTCAGTGTGGTCTGGAACTGGGTGATCTCCTTACGGCGATACCCATGCAGGTCTTGCCCCGGCGTACCGGTCAGCAGCGATGCGTTGCTCAACGCGCCGCCAATGGGACGGACACCAGCGAACAGGATATCCGTGGTATTGAGCTGCACTGGCGCGTTGGGCAACGCATCGCTGCTGACCGGTACGCCGGGGCAAG            <  1:467394/235‑1                                                                              ATACCCATGCAGGTCTGGCCCCGGCGTGCCGGTCAGCAGCGATGCGTTGCTCAACGCGCCGCCAATGGGACGGACACCAGCGAACAGGATATCCGTGGTATTGAGCTGCACTGGCGCGTTGAGCAACGCATCGCTGCTGACCGGTACGCCGG                  <  1:240137/152‑1                                                                                                           CGGCCAGCAGCGATGCGTTGCTCAACGCGCCGCCAATGGGACGGACACCAGCGAACAGGATATCCGTGGTATTGAGCTGCACTGGCGCGTTGAGCAACGCATCGCTGCTGACCGGTACGCCGGGGCAAGACCTGCATGG  <  2:183896/139‑1                                                                                                                                        CCGCCAATGGGACGGACACCAGCGAACAGGATATCCGTGGTATTGAGCTGCACTGGCGCGTTGAGCAACGCATCGCTGCTGACCGGTACGCCGG                  <  1:20793/94‑1                                                                                                                                                                                                                                                       GTCATCCGGCTGGCACCCATCACCTGGTCGAAGAAATGGGTCAGTGTGGTCTGGAACTGGGTGATCTCCTTACGGCGATACCCATGCAGGTCTTGCCCCGGCGTACCGGTCAGCAGCGATGCGTTGCTCAACGCGCCGCCAATGGGACGGACACCAGCGAACAGGATATCCGTGGTATTGAGCTGCACTGGCGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/881870‑881673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgttgAGCAACGCATCGCTGCTGACCGGTACGCCGGGGCAAGACCTGCATGG  >  AE015451/881743‑881789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.