| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2560052 = | 18 (0.700) | 3 (0.120) | 3/298 | NT | 14.7% | coding (14/603 nt) | PP_2243 | conserved protein of unknown function |
| ? | AE015451 | 2560094 = | 18 (0.750) | coding (56/603 nt) | PP_2243 | conserved protein of unknown function | |||||
GTCTGACTGATGGGCTAGCGGCAGGATGCCGTCATCCGTATGGTGCAGGCGCCCGTTCTTCTGGGCCTGGGTCAGGGCATGGCAGATCAGGGTCAGGCGGATGGCTTTCACCAGGCATTTCTCGCAGCGGGCTGGGGTGCATGGTTTAGCACGCTGCGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2560212‑2560052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgagaAATGCCTGGTGAAAGCCATCCGCCTGACCCTGATCTGCCATGCCCTGACCCAGGCCCAGAAGAACGGGCGCCTGCACCATACGGATGACGGCATCCTGCCGCTAGCCCATCAGTCAGACGCCGACC > AE015451/2560094‑2560219 GTCTGACTGATGGGCTAGCGGCAGGATGCCGTCATCCGTATGGTGCAGGCGCCCGTTCTTCTGGGCCTGGGTCAGGGCATGGCAGATCAGGGCCAGGCGGATGGCTTTCACCAGGCATTTCTCGCAGCGGGCTGGGGTGCATGGTTTAGCACGC > 1:178081/1‑154 CCTGGGTCAGGGCATGGCAGATCAGGGTCAGGCGGATGACTTACACCAGGCATTTCTCGCAGCGTGCTGAGGTGCAAGGTTTAGCACGCTGCGAGAAATGCCTGGTGAAAGCCATCCGCCTGACCCTGATCTG < 2:178077/133‑1 CTGGGTCAGGGCATGGCAGATCAGGGTCAGGCGGATGGCTGTCACCAGGCTTTTCTCGCGGCTGGCTGGGGTGCATTGTTTAGCACGCGGCGAGAAATGCCTGGTGAAAGCCATCCGCCTG < 1:221121/121‑1 tgtCTTTCACCAGCCATTTCTCGCAGCGGGCTGGGGTGCATGCTTTAGCACGCTGCGAGCAATGCCTGGTGAAAGCCATCCGCCTGACCCTGATCTGCCATGCCCTGACCCAGGCCCAGAAGAACGGG < 2:477512/125‑1 AGAAATGCCTGGTGAAAGCAATCCGCCTGACCCTGATCAGCCATGCACTGACCCCGGCCCAGAAGAACGGGCGCCTGCACCATACGGATGACGGCATCCTGCCGCTGGCCCATCAGTCAGACGCCGACC < 2:288323/129‑1 GTCTGACTGATGGGCTAGCGGCAGGATGCCGTCATCCGTATGGTGCAGGCGCCCGTTCTTCTGGGCCTGGGTCAGGGCATGGCAGATCAGGGTCAGGCGGATGGCTTTCACCAGGCATTTCTCGCAGCGGGCTGGGGTGCATGGTTTAGCACGCTGCGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2560212‑2560052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgagaAATGCCTGGTGAAAGCCATCCGCCTGACCCTGATCTGCCATGCCCTGACCCAGGCCCAGAAGAACGGGCGCCTGCACCATACGGATGACGGCATCCTGCCGCTAGCCCATCAGTCAGACGCCGACC > AE015451/2560094‑2560219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |