New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2748791 =	26 (1.010)	3 (0.120)	3/300	NT	12.4%	coding (66/276 nt)	PP_2404	conserved exported protein of unknown function
	?	AE015451	2748910 =	18 (0.740)					coding (185/276 nt)	PP_2404	conserved exported protein of unknown function

CCACCGGCCTTGAGCATCCGGCGCCGATCAGTTTTCATGGCAACCGTCCGTGGCATAGGTGAGGTACTGCACGCTTTGCCGCTGGCCATGGGAGTCAAGGTAGTCCATTCGGGTATTCACCAGGCCGCAGGCATTGCGCTGATCATCCTGCACCGACAGCACTCTCTTCACATCCAGAGGCTCACCGTAGCGGTACTGCATGACCCCGCCATCCTGCATCGGGGCAGTGGCGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2749028‑2748791 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcctggTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCGCTGGCGGGCGCCAGCCAGTGGTTGAATTCGCCGCCCCT  >  AE015451/2748910‑2749142                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCACCGGCCTTGGGCATCCGGCGCCGATCAGTTTTCATGGCAACCGTCCGTGGCATAGGTGAGGTACTGCACGCTTTGCCGCTGGCCATGGGAGTCAAGGTAGTCCATTCGGGTATTCACCAGGCCGCAGGCATTGCGCTGATCATCCTGCACCGACAGCACTCTCTTCACATCCAGAGGCTCACCGTAGCGGTACTGCATGACCCCGCCATCCTGCATCGGGGCAGTGGCG                                                                                                                                                                                                                                                 <  1:514063/232‑1                    GGCGCCGATCAGTTTTCATGGCAACCGTCCGTGGCATAGGTGAGGTACTGCACGCTTTGCCGCTGGCCATGGGAGTCAAGGTAGTCCATTCGGGTATTCACCAGGCCGCAGGCATTGCGCTGATCATCCTGCACCGACAGCACTCTCTTCACATCCAGAGGCTCACCGTAGCGGTACTGCATGACCCCGCCATCCTGCATCGGGGCAGTGGCGGCCTG                                                                                                                                                                                                                                            >  2:375438/1‑218                                               TCCGTGGCATAGGTGAGGTACTGCACGCTTTGCCGCTGGCCATGGGAGTCAAGGTAGTCCATTCGGGTATTCACCAGGCCGCAGGCATTGCGCTGATCATCCTGCACCGACAGCACTCTCTTCACATCCAGAGGCTCACCGTAGCGGTACTGCATGACCCCGCCATCCTGCATCGGGGCAGTGGCGGCCTGGTGAATACC                                                                                                                                                                                                                                   <  2:126509/200‑1                                                                                       CATGGGAGTCAAGGTAGTCCATTCGGGTATTCACCAGGCCGCAGGCATTGCGCTGATCATCCTGCACCGACAGCACTCTCTTCACATCCAGAGGCTCACCGTAGCGGTACTGCATGACCCCGCCATCCTGCATCGGGGCAGTGGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCG                                                                                                                                                                                                   <  1:232976/192‑1                                                                                                                  TATTCACCAGGCCGCAGGCATTGCGCTGATCATCCTGCACCGACAGCACTCTCTTCACATCCAGAGGCTCACCGTAGCGGTACTGCATGACCCCGCCATCCTGCATCGGGGCAGTGGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCG                                                                                                                                                                                           <  1:470310/173‑1                                                                                                                                                                                                                                            TGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCGCTGGCGGGCGCCAGCCAGTGGTTGAATTCGCCGCCCCT  <  1:126513/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCACCGGCCTTGAGCATCCGGCGCCGATCAGTTTTCATGGCAACCGTCCGTGGCATAGGTGAGGTACTGCACGCTTTGCCGCTGGCCATGGGAGTCAAGGTAGTCCATTCGGGTATTCACCAGGCCGCAGGCATTGCGCTGATCATCCTGCACCGACAGCACTCTCTTCACATCCAGAGGCTCACCGTAGCGGTACTGCATGACCCCGCCATCCTGCATCGGGGCAGTGGCGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2749028‑2748791 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcctggTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCGCTGGCGGGCGCCAGCCAGTGGTTGAATTCGCCGCCCCT  >  AE015451/2748910‑2749142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.