New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2748791 =	26 (1.010)	3 (0.120)	3/300	NT	12.4%	coding (66/276 nt)	PP_2404	conserved exported protein of unknown function
	?	AE015451	2748910 =	18 (0.740)					coding (185/276 nt)	PP_2404	conserved exported protein of unknown function

GTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCGCTGGCGGGCGCCAGCCAGTGGTTGAATTCGCCGCCCCT  >  AE015451/2748707‑2749142                                                                                                                                                                                                            |                                                                                                                                                                                                                                         gtTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCCGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCAt                                                                                                                                                                                                           <  1:485216/235‑1 (MQ=255)            tccgtggcataggtgaggtactgcacgctttgccgctggccatgggagtcaaggtagtccattcgggtattcaccaggccgcaggcattgcgctgatcatcctgcaccgacagcactctcttcacatccagaggctcaccgtagcggtactgcatgaccccgccatcctgcatcggggcagtggcggcctggTGAATAcc                                                                                                                                                                                                                                   <  2:126509‑M2/8‑1 (MQ=255)                 gCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCg                                                                                                                                                                                           <  1:338479/235‑1 (MQ=255)                                     cgctttgccgctggccatgggagtcaaggtagtccattcgggtattcaCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATa                                                                                                                                                                                                                                     <  1:470310‑M1/125‑1 (MQ=255)                                          gcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCacgga                                                                                                                                                                  >  1:422680/1‑235 (MQ=255)                                             cgctggccatgggagtcaaggtagtccattcgggtattcaCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATg                                                                                                                                                                                                          <  1:232976‑M1/152‑1 (MQ=255)                                                    catgggagtcaaggtagtccattcgggtattcaccaggccgcaggcattgcgctgatcatcctgcaccgacagcactctcttcacatccagaggctcaccgtagcggtactgcatgaccccgccatcctgcatcggggcagtggcggcctggTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCg                                                                                                                                                                                                   <  1:232976‑M2/40‑1 (MQ=255)                                                        accGTGCTGGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATAcc                                                                                                                                                                                                                                   <  2:370675/155‑1 (MQ=255)                                                                             ggtattcaCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCacgga                                                                                                                                                                  <  2:126509‑M1/192‑1 (MQ=255)                                                                               tattcaccaggccgcaggcattgcgctgatcatcctgcaccgacagcactctcttcacatccagaggctcaccgtagcggtactgcatgaccccgccatcctgcatcggggcagtggcggcctggTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCg                                                                                                                                                                                           <  1:470310‑M2/48‑1 (MQ=255)                                                                                      CAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGcc                                                                                                                                       >  2:375438‑M1/1‑218 (MQ=255)                                                                                           CGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCCCAAGGCCggtgg                                                                                                                    <  1:514063‑M1/232‑1 (MQ=255)                                                                                                       gATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCg                                                                                                                                                                                           <  2:345172/149‑1 (MQ=255)                                                                                                           gaGGATGGCGGGGTCATGCAGGACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCg                                                                                                                                                                                           <  1:266479/144‑1 (MQ=255)                                                                                                           cAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACgg                                                                                                >  1:454281/1‑236 (MQ=255)                                                                                                                      ggTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTgcgct                                                                                                           >  2:425292/1‑214 (MQ=255)                                                                                                                                     cTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGa                                                                        <  2:454277/234‑1 (MQ=255)                                                                                                                                             aGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCggtg                                                                                                                     >  1:328148/1‑181 (MQ=255)                                                                                                                                                        gtgAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACgg                                                     >  1:130577/1‑234 (MQ=255)                                                                                                                                                                  tGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGc                                                                              >  2:169764/1‑199 (MQ=255)                                                                                                                                                                   gCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCg                                        >  1:267941/1‑236 (MQ=255)                                                                                                                                                                        cGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCGCTgg                                    >  1:332630/1‑235 (MQ=255)                                                                                                                                                                                   gatCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATc                                         >  1:508133/1‑219 (MQ=255)                                                                                                                                                                                        gcgcAATGCCTGCGGCCTGGTGAATAccc                                                                                                                                                                                                                                  >  2:468767/1‑29 (MQ=255)                                                                                                                                                                                        gcgcAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACa                                                            >  1:274435/1‑195 (MQ=255)                                                                                                                                                                                            aaTGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCACACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTg                                                                         >  1:13387/1‑178 (MQ=255)                                                                                                                                                                                                         tggTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCGCTGGCGGGCGCCAGCCAGTGGTTGAATTCGCCGCCCCt  <  1:126513‑M2/233‑1 (MQ=255)                                                                                                                                                                                                            |                                                                                                                                                                                                                                         GTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGACGGTTGCCATGAAAACTGATCGGCGCCGGATGCTCAAGGCCGGTGGTTTTGCGCTGGCGCTGACGGGGCTTGGGTTGGCTGGGCACCTGAAGGCACGCGACAGCTACGGCGCCATGCCATCGCTGGCGGGCGCCAGCCAGTGGTTGAATTCGCCGCCCCT  >  AE015451/2748707‑2749142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.