New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2748791 =	26 (1.010)	3 (0.120)	3/300	NT	12.4%	coding (66/276 nt)	PP_2404	conserved exported protein of unknown function
	?	AE015451	2748910 =	18 (0.740)					coding (185/276 nt)	PP_2404	conserved exported protein of unknown function

CCCTTGCCTGCGGGAGTTTGTATTGCAGTGTATCTGGCACGGGTAGGGATACAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGA  >  AE015451/2748558‑2748982                                                                                                                                                                                                                                          |                                                                                                                                                                                                aggggcggcgaattcaaccactggctggcgcccgccagcgatggcatggcgccgtagctgtcgcgtgccttcaggtgcccagccaacccaagccccgtcagcgccagcgcaaaaccaccggccttgagcatccggcgccgatcagttttcatggcaaccgtccgtggcataggtgaggtactgcacgctttgccgctggccatgggagtcaaggtagtccattcgggtattcaCCa                                                                                                                                                                                               <  1:126513‑M1/3‑1 (MQ=255)                           aGTGTAGCTGGCACGGGTAGGGATACAGCAGGAGGCACATCACAACGTTGGGCGACCCATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATg                                                                                                                                                                     <  1:78420/236‑1 (MQ=255)                                                  tACAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTAc                                                                                                                                              <  1:129279/236‑1 (MQ=255)                                                        aggaggCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACt                                                                                                                                                                                     >  1:318078/1‑191 (MQ=255)                                                        aggaggCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCa                                                                                                                                                                          >  2:338475/1‑202 (MQ=255)                                                                    acaACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTAc                                                                                                                                              <  1:451552/218‑1 (MQ=255)                                                                    acaACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGAtgt                                                                                                                             >  1:337580/1‑235 (MQ=255)                                                                                    caTGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTc                                                                                                              <  2:337576/234‑1 (MQ=255)                                                                                                       aCGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCaa                                                                                         <  1:509730/236‑1 (MQ=255)                                                                                                        cGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGa                                                                                                                           <  2:419123/201‑1 (MQ=255)                                                                                                                           ggggAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTg                                                                            >  1:375442/1‑229 (MQ=255)                                                                                                                               aGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGGCATGCAGTACCGCTACGGTGAGCCTCTg                                                                                                                                  >  1:42462/1‑171 (MQ=255)                                                                                                                                                      gtTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATg                                                                                                                                                          <  2:318074/124‑1 (MQ=255)                                                                                                                                                      gtTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCCGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCAt                                           <  1:485216/235‑1 (MQ=255)                                                                                                                                                      gtTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGAAGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGACg                                                                                                             >  2:375404/1‑169 (MQ=255)                                                                                                                                                                      gCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCg                           <  1:338479/235‑1 (MQ=255)                                                                                                                                                                            aaCCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCgg                                                                                                            >  2:304918/1‑148 (MQ=255)                                                                                                                                                                            aaCCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGc                                                                                      >  1:297491/1‑170 (MQ=255)                                                                                                                                                                                  aaGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAgc                                                                                             <  2:406446/157‑1 (MQ=255)                                                                                                                                                                                       tATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGGTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATg                                                                                                                                                                            <  2:44038/73‑1 (MQ=255)                                                                                                                                                                                          cgctttgccgctggccatgggagtcaaggtagtccattcgggtattcaCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATa                                                                     <  1:470310‑M1/125‑1 (MQ=255)                                                                                                                                                                                            ccagcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTg                                                                                                                                                                                    <  1:441760/60‑1 (MQ=255)                                                                                                                                                                                            ccagcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTg                                                                                                                                                                                    >  2:441756/1‑60 (MQ=255)                                                                                                                                                                                               gcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCacgga  >  1:422680/1‑235 (MQ=255)                                                                                                                                                                                                cgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGa                                                                                                                                                                       <  1:292236/69‑1 (MQ=255)                                                                                                                                                                                                  cgctggccatgggagtcaaggtagtccattcgggtattcaCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATg                                          <  1:232976‑M1/152‑1 (MQ=255)                                                                                                                                                                                                             accGTGCTGGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATAcc                                                                   <  2:370675/155‑1 (MQ=255)                                                                                                                                                                                                                             gTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCCGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGc                                                                                      <  2:402142/121‑1 (MQ=255)                                                                                                                                                                                                                              tGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTCCGGTGAGCCTCTGGATGGGAAGAGAGTGCTGTCGGTGCAGGCTGATCAGCGCAATGCCTGCGGCCTgg                                                                           >  2:27911/1‑131 (MQ=255)                                                                                                                                                                                                                                  ggtattcaCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCacgga  <  2:126509‑M1/192‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                CCCTTGCCTGCGGGAGTTTGTATTGCAGTGTATCTGGCACGGGTAGGGATACAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCAAAGCGTGCAGTACCTCACCTATGCCACGGA  >  AE015451/2748558‑2748982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.