New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3134882	24 (0.930)	3 (0.120)	3/306	NT	11.3%	coding (935/1341 nt)	PP_2751	conserved exported protein of unknown function
	?	AE015451	= 3134950	24 (0.970)					coding (1003/1341 nt)	PP_2751	conserved exported protein of unknown function

GGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3134688‑3134882 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaaTCGCGGCATTGATGAGGCCGATGTTGTAGTACACCTTGCCGAAGTAGCGCTTATCCTTCAGGTCGCTCTTGCCGA  <  AE015451/3134950‑3134876                                                                                                                                                                                                                                                                                GGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCA                                                                              <  1:20640/194‑1                       CGCTCCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAATCGCGGCATTGA                                                                 <  1:504879/185‑1                                   CCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAATCGCGGCATTGATGAGGCCGATGTTGTAGTACACCTTGCCGAAGTAGCGCTTATCCTTCAGGTCGCTCTTGCCGA  <  1:278695/236‑1                                                                                    TGCTGCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAATCGCGGCATTGATGAGGCCGTTGTTGTAGTACACCTTGCCGAAGTAGCGCTTATCCTTCAGGTCGCTCTTGCCG   <  1:241895/186‑1                                                                                                                                                                                                                                                                                GGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3134688‑3134882 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaaTCGCGGCATTGATGAGGCCGATGTTGTAGTACACCTTGCCGAAGTAGCGCTTATCCTTCAGGTCGCTCTTGCCGA  <  AE015451/3134950‑3134876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.