New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3134882	24 (0.930)	3 (0.120)	3/306	NT	11.3%	coding (935/1341 nt)	PP_2751	conserved exported protein of unknown function
	?	AE015451	= 3134950	24 (0.970)					coding (1003/1341 nt)	PP_2751	conserved exported protein of unknown function

CTGGGGCGTGTCCACTCCGGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCA  >  AE015451/3134670‑3135116                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           cTGGGGCGTGTCCACTCCGGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTTGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAg                                                                                                                                                                                                                               <  2:235268/226‑1 (MQ=255)       cGTGTCCACTCCGGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCg                                                                                                                                                                                                               <  1:241736/236‑1 (MQ=255)             cACTCCGGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAg                                                                                                                                                                                                          <  1:509647/235‑1 (MQ=255)                   ggTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCg                                                                                                                                                                                                               <  1:354850/224‑1 (MQ=255)                                         cGCTCCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAtcgcggcattga                                                                                                                                                                                                                                <  1:504879‑M1/185‑13 (MQ=255)                                             tCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCg                                                                                                                                                                                                               <  2:433020/198‑1 (MQ=255)                                                     ccGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAtcgcggcattgatgaggccgatgttgtagtacaccttgccgaagtagcgcttatccttcaggtcgctcttgccga                                                                                                                                                                 <  1:278695‑M1/236‑76 (MQ=255)                                                         tGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAg                                                                                                                                                             >  1:430717/1‑236 (MQ=255)                                                                 atcatcGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTgcg                                                                                                                                                     >  1:249391/1‑236 (MQ=255)                                                                             gTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCg                                                                                                                                                                                                               <  1:466716/166‑1 (MQ=255)                                                                              gcTGGGCCGGCTCCGAGGCCGACGGGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCAcc                                                                                                                                                 <  2:367764/226‑1 (MQ=255)                                                                                tGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGta                                                                                                                                                                                                     <  1:169079/173‑1 (MQ=255)                                                                                        cTCCGAGGCCGACGTGCTGCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTGTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCg                                                                                                                                                                                                               <  2:108059/155‑1 (MQ=255)                                                                                           cGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTGCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCAc                                                                                                                            <  1:99326/235‑1 (MQ=255)                                                                                                      tgctgcCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAtcgcggcattgatgaggccgttgttgtagtacaccttgccgaagtagcgcttatccttcaggtcgctcttgccg                                                                                                                                                                  <  1:241895‑M1/186‑75 (MQ=255)                                                                                                             tGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCg                                                                                                                                                                                                               <  2:512606/134‑1 (MQ=255)                                                                                                             tGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCg                                                                                                                                                                                                               >  1:512610/1‑134 (MQ=255)                                                                                                                                             tGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATc                                                                         >  1:321272/1‑236 (MQ=255)                                                                                                                                                         ccGGTGGCGGCGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACGCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAg                                                                                                                                                                                                          <  2:100049/95‑1 (MQ=255)                                                                                                                                                                  aCGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGgt                                                                                                                                                                                                        >  2:112340/1‑88 (MQ=255)                                                                                                                                                                                                    caTACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCa                    >  1:171370/1‑234 (MQ=255)                                                                                                                                                                                                         tCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGaa                                                                             >  2:510880/1‑172 (MQ=255)                                                                                                                                                                                                          cGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATg                                                                                                               >  1:497893/1‑137 (MQ=255)                                                                                                                                                                                                             tGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAg                                                                                                                                                                                                          <  1:406203/43‑1 (MQ=255)                                                                                                                                                                                                              gTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACCACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGCCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCCAGCATCTGAATATCGACGCCGCGCGcc                                                            <  1:484003/184‑1 (MQ=255)                                                                                                                                                                                                               tCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGAttgccgacatcgagtatgtgctggcgcaggcgctggtgaatctcgaaaccgtcgccaccggggaacggcgccagggcctgatagcccttggccgccgcgccggcaggaagcacgtcggcctcggagccggcccagacgtcgccgatgatgcgttccaccgg       <  1:278695‑M2/236‑162 (MQ=255)                                                                                                                                                                                                                cGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGc                                              >  1:476392/1‑196 (MQ=255)                                                                                                                                                                                                                cGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTc                                           >  2:512187/1‑199 (MQ=255)                                                                                                                                                                                                                cGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACAACGGCCTCATCAATGCCGCGAttgccgacatcgagtatgtgctggcgcaggcgctggtgaatctcgaaaccgtcgccaccggggaacggcgccagggcctgatagcccttggccgccgcgccggcaggcagca                                                        <  1:241895‑M2/186‑113 (MQ=255)                                                                                                                                                                                                                    aaGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCa  >  1:479927/1‑236 (MQ=255)                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           CTGGGGCGTGTCCACTCCGGTCGGCATAAAGACGGCTGCACGCTTCGGCATCCCGGTGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCA  >  AE015451/3134670‑3135116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.