New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3134882	24 (0.930)	3 (0.120)	3/306	NT	11.3%	coding (935/1341 nt)	PP_2751	conserved exported protein of unknown function
	?	AE015451	= 3134950	24 (0.970)					coding (1003/1341 nt)	PP_2751	conserved exported protein of unknown function

TGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCACGAGGGCGGTGGTGCGGCCCGCGTTCAGCAATGGGACGGAGAGAAATGG  >  AE015451/3134726‑3135165                                                                                                                                                                                                                                 |                                                                                                                                                                                                                        tGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAg                                                                                                                                                                                                              >  1:430717/1‑236 (MQ=255)         atcatcGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTgcg                                                                                                                                                                                                      >  1:249391/1‑236 (MQ=255)                      gcTGGGCCGGCTCCGAGGCCGACGGGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCAcc                                                                                                                                                                                                  <  2:367764/226‑1 (MQ=255)                                   cGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTGCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCAc                                                                                                                                                                             <  1:99326/235‑1 (MQ=255)                                                                                     tGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATc                                                                                                                          >  1:321272/1‑236 (MQ=255)                                                                                                                                            caTACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCa                                                                     >  1:171370/1‑234 (MQ=255)                                                                                                                                                 tCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGaa                                                                                                                              >  2:510880/1‑172 (MQ=255)                                                                                                                                                  cGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATg                                                                                                                                                                >  1:497893/1‑137 (MQ=255)                                                                                                                                                      gTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACCACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGCCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCCAGCATCTGAATATCGACGCCGCGCGcc                                                                                                             <  1:484003/184‑1 (MQ=255)                                                                                                                                                       tCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGAttgccgacatcgagtatgtgctggcgcaggcgctggtgaatctcgaaaccgtcgccaccggggaacggcgccagggcctgatagcccttggccgccgcgccggcaggaagcacgtcggcctcggagccggcccagacgtcgccgatgatgcgttccaccgg                                                        <  1:278695‑M2/236‑162 (MQ=255)                                                                                                                                                        cGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGc                                                                                               >  1:476392/1‑196 (MQ=255)                                                                                                                                                        cGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTc                                                                                            >  2:512187/1‑199 (MQ=255)                                                                                                                                                        cGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACAACGGCCTCATCAATGCCGCGAttgccgacatcgagtatgtgctggcgcaggcgctggtgaatctcgaaaccgtcgccaccggggaacggcgccagggcctgatagcccttggccgccgcgccggcaggcagca                                                                                                         <  1:241895‑M2/186‑113 (MQ=255)                                                                                                                                                            aaGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCa                                                   >  1:479927/1‑236 (MQ=255)                                                                                                                                                                gCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCAc                                                  <  2:430713/233‑1 (MQ=255)                                                                                                                                                                      tGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGAGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGcgacga                                                      >  1:15407/1‑218 (MQ=255)                                                                                                                                                                             gaaGCGCTACTTCGGCAAGGTGTACTACAACACCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCAc                                                                                                                                                                             <  2:497889/96‑1 (MQ=255)                                                                                                                                                                               aGCGCTACTTCGGCAAGGTGTACTACACCATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAgg                                                                                                       <  2:196452/165‑1 (MQ=255)                                                                                                                                                                                     aCTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCAc                                                                                                                                                                             >  1:32500/1‑89 (MQ=255)                                                                                                                                                                                     aCTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCAc                                                                                                                                                                             <  2:32498/89‑1 (MQ=255)                                                                                                                                                                                                   tactacAACATCGGCCTCATCAATGCCACGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGGGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGAc                                                                                                                       >  1:114864/1‑129 (MQ=255)                                                                                                                                                                                                             tCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCCGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGCGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCACGAGGGCggt                                         >  1:14255/1‑197 (MQ=255)                                                                                                                                                                                                             tCGGCCTCATCAATGCCGCGATGGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCACGAGGGCGGTGGTGCgg                                  <  1:28999/204‑1 (MQ=255)                                                                                                                                                                                                              cGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCACGAGGGCGGTGGTGCGGCCCGCGTTCAGCAATGGGACGGAGAGAAATgg  >  1:317598/1‑235 (MQ=255)                                                                                                                                                                                                               ggCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCtt                                                                                             <  2:424154/143‑1 (MQ=255)                                                                                                                                                                                                                gCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGgctgct                                                                                 >  2:134556/1‑154 (MQ=255)                                                                                                                                                                                                                   tcatcaATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCACGAGGGCggt                                         >  1:61550/1‑191 (MQ=255)                                                                                                                                                                                                                      tcaATGCCGCGAttgccgacatcgagtatgtgctggcgcaggcgctggtgaatctcgaaaccgtcgccaccggggaacggcgccagggcctgatagcccttggccgccgcgccggcaggaagcacgtcggcctcggagccggcccagacgtcgccgatgatgcgttccaccgggatgccggagcg                                            <  1:504879‑M2/185‑174 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                        TGGAACGCATCATCGGCGACGTCTGGGCCGGCTCCGAGGCCGACGTGCTTCCTGCCGGCGCGGCGGCCAAGGGCTATCAGGCCCTGGCGCCGTTCCCCGGTGGCGACGGTTTCGAGATTCACCAGCGCCTGCGCCAGCACATACTCGATGTCGGCAAGAGCGACCTGAAGGATAAGCGCTACTTCGGCAAGGTGTACTACAACATCGGCCTCATCAATGCCGCGATTGCCGTCGAGGCGCTGCGCACCGCCCAGGGCAAGTTTGGTCACCGCCCTCTCAATGGTGAGGAGGCGCGCTGGGGCTTCGAGCATCTGAATATCGACGCCGCGCGCCTCAAGGCCAGTGGCTTCGAAGGGCTGCTGCCGCCGCTGCAGCTGTCCTGCTCCGATCACGAGGGCGGTGGTGCGGCCCGCGTTCAGCAATGGGACGGAGAGAAATGG  >  AE015451/3134726‑3135165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.