New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3910887 =	31 (1.200)	3 (0.120)	3/304	NT	9.7%	coding (197/840 nt)	PP_3451	conserved exported protein of unknown function
	?	AE015451	3910927 =	26 (1.060)					coding (237/840 nt)	PP_3451	conserved exported protein of unknown function

AGTTGCTGGTACTGGCTGAGCGAGCGCCCCAGCTGCGCTTTCCAGTAGCTGTTCAGGCCCTCGCCATCCAGCTCGTCGAGGCGCTGGTAGTAGGCCGGGTCCATGTACAGCCCCAGCACCAGCTGCAAGCCCTCGGCACGCGCGGTGCGCAGGCTGTTGGCCAGCCAGCCCTGGGCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3911067‑3910887 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgcGCGTGCCGAGGGCTTGCAGCTGGTGCTGGGGCTGTACATGGACCCGGCCTACTACCAGCGCCTCGACGAGCTGGATGGCGAGGGCCTGAACAGCTACTGGAAAGCGCAGCTGGGGCGCTCGCTCAGCCAGTACCAGCAACTGCGCCAGGCCTGGCAGTTGCCAGTGGACGGCTGGTACCTGCCCATGGAGCTGGACGACCAGCATCTGCGCGAGACCGAACGGCGCG  >  AE015451/3910927‑3911153                                                                                                                                                                                                                                                                                                                                                                                                                          AGTTGCTGGTACTGGCTGAGCGAGCGCCCCAGCTGCGCTTTCCAGTAGCTGTTCAGGCCCTCGCCATCCAGCTCGTCGAGGCGCTGGTAGTAGGCCGGGTCCATGTACAGCCCCAGCACCAGCTGCAAGCCCTCGGCACGCGCGGTGCGCAGGCTGTTGGCCAGCCAGCCCTGGGCACCGCGCGTGCCGAGGGCTTGCAGCTGGTGCTGGGGCTGTACATGGACCCtgtctcttat                                                                                                                                                                              >  1:230911/1‑226                                                                                             GGCCGGGTCCATGTACAGCCCCAGCACCAGCTGCAAGCCGTCGGCACGCGCGGTGCGCAGGCTGTTGGCCAGCCAGCCCTGGGCACCGCGCGTGCCGAGGGCTTGCAGCTGGTGCTGGG                                                                                                                                                                                                       <  2:230907/119‑1                                                                                                     CCATGTACAGCCCCAGCACCAGCTGCAAGCCCTCGGCACGCGCGGTGCGCAGGCTGTTGGCCAGCCAGCCCTGGGCACC                                                                                                                                                                                                                                       >  2:190444/1‑79                                                                                                                                                   GCGCAGGCTGTTGGCCAGCCAGCCCTGGGCACCGCGCGTGCCGAGGGCTTGCAGCTGGTGCTGGGGCTGTACATGGA                                                                                                                                                                                           <  2:340838/77‑1                                                                                                                                                                                CACCGCGCGTGCCGAGGGCTTGCAGCTGGTGCTGGGGCTGTACATGGACCCGGCCTACTACCAGCGCCTCGACGAGCTGGATGGCGAGGGCCTGAACAGCTACTGGAAAGCGCAGCTGGGGCGCTCGCTCAGCCAGTACCAGCAACTGCGCCAGGCCTGGCAGTTGCCAGTGGACGGCTGGTACCTGCCCATGGAGCTGGACGACCAGCATCTGCGCGAGACCGAACGGCGCG  >  2:274092/1‑233                                                                                                                                                                                   CGCGCGTGCGGAGGGCTTGCAGCTGGTGCTGGGGCTGTACATGGACCCGGCCTACTACCAGCGCCTCGACGAGCTGGATGGCGAGGGCCTGAACAGCTACTGGAAAGCGCAGCTGGGGCGCTCGCTCAGCCAGTACCAGCAACTGCGCCAGGCCTGGCAGTTGCCAGTGGACGGCTGGTACCTGC                                               <  2:182319/185‑1                                                                                                                                                                                                                                                                                                                                                                                                                          AGTTGCTGGTACTGGCTGAGCGAGCGCCCCAGCTGCGCTTTCCAGTAGCTGTTCAGGCCCTCGCCATCCAGCTCGTCGAGGCGCTGGTAGTAGGCCGGGTCCATGTACAGCCCCAGCACCAGCTGCAAGCCCTCGGCACGCGCGGTGCGCAGGCTGTTGGCCAGCCAGCCCTGGGCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3911067‑3910887 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgcGCGTGCCGAGGGCTTGCAGCTGGTGCTGGGGCTGTACATGGACCCGGCCTACTACCAGCGCCTCGACGAGCTGGATGGCGAGGGCCTGAACAGCTACTGGAAAGCGCAGCTGGGGCGCTCGCTCAGCCAGTACCAGCAACTGCGCCAGGCCTGGCAGTTGCCAGTGGACGGCTGGTACCTGCCCATGGAGCTGGACGACCAGCATCTGCGCGAGACCGAACGGCGCG  >  AE015451/3910927‑3911153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.