New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5559582 | 17 (0.660) | 4 (0.180) | 4/278 | NT | 21.7% | coding (915/1188 nt) | hisZ | ATP phosphoribosyltransferase regulatory subunit |
? | AE015451 | = 5559562 | 14 (0.620) | coding (935/1188 nt) | hisZ | ATP phosphoribosyltransferase regulatory subunit |
ACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCCGCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5559418‑5559582 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgggcgcgcccggccaCTGGTTTCTCCACGGATTTGAAGACCCTGGTCACACTGGGGCGAGCGGAGGTCGTATTGCCAACTGGCGGCATCTGGATGCCGGACAGTGGCGATGCGG < AE015451/5559562‑5559464 ACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCCGCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCACTGGTTTCT < 1:513916/174‑1 TGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCCGCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCACTGGTTTCTCCACGGATTTGAAGACCCTGGTCACACTG < 2:124805/187‑1 CAGAGGGCCGCATTGCCACTGTCCGGCATCCAGATGCCGCCAGTTGGCAATACGACCTCCGCTCTCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCC < 2:241005/111‑1 CGCTCGCCCCAGTGTGACCAGGGCCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCACTGGTTTCTCAACGGATTTGAAGACCCTGGTCACACTGGGGCGAGCGGAGGTCGTATTGCCAACTGGCGGCATCTGGATGCCGGACA > 1:306987/1‑154 CAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCACTGGTTTCTCCACGGATTTGAAGACCCTGGTCACACTGGGGCGAGCGGAGGTCGTATTGCCAACTGGCGGCATCTGGATGCCGGACAGTGGCGATGCGG > 1:238938/1‑157 ACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCCGCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5559418‑5559582 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgggcgcgcccggccaCTGGTTTCTCCACGGATTTGAAGACCCTGGTCACACTGGGGCGAGCGGAGGTCGTATTGCCAACTGGCGGCATCTGGATGCCGGACAGTGGCGATGCGG < AE015451/5559562‑5559464 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |