New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 6032294 = | 23 (0.890) | 3 (0.130) | 3/296 | NT | 11.7% | coding (1148/1590 nt) | dppA‑IV | periplasmic dipeptide transport protein |
? | AE015451 | 6032394 = | 24 (1.000) | coding (1248/1590 nt) | dppA‑IV | periplasmic dipeptide transport protein |
AGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/6032534‑6032294 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccaaggcCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGA > AE015451/6032394‑6032516 AGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGC < 1:161704/233‑1 CGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGACCCATTCGATCAAGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGC > 1:175323/1‑178 TGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCG < 2:487643/163‑1 TTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTG < 1:490730/176‑1 GCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCACTCTTCGCCAAGTCGGCTTGCAGCATCTGCc > 1:74713/1‑82 CATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCCGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACACCGGCGACCCAGACAACTTCCTCAGCCCGCc > 2:108986/1‑144 ATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGA > 2:365549/1‑181 ATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGC < 1:292830/50‑1 ATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGC > 2:292826/1‑50 AGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/6032534‑6032294 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccaaggcCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGA > AE015451/6032394‑6032516 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |