New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 3617570 = | 32 (1.240) | 3 (0.120) | 3/304 | NT | 8.3% | coding (595/1170 nt) | PP_3188 | conserved protein of unknown function |
? | AE015451 | 3617599 = | 36 (1.460) | coding (624/1170 nt) | PP_3188 | conserved protein of unknown function |
ACCCGAGCCTGGCAATTGCCCGGCAACGGGCAGCACACCTGCAACTGGCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGATGTGGCGCAGCATCTGCGCCCGGCCAACGGCTATTGCAACTTC > AE015451/3617373‑3617818 | aCCCGAGCCTGGCAATTGCCCGGCAACGGGCAGCACACCTGCAACTGGCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGtt > 1:193717/1‑235 (MQ=255) cTGGCAATTGCCCGGCAACGGGCAGCACACCTGCAACTGGCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGtgct < 1:143269/236‑1 (MQ=255) ccGGCAACGGGCAGCACACCTGCAACTGGCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGa > 2:488916/1‑234 (MQ=255) aCTGGCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTgg < 1:152052/236‑1 (MQ=255) ggCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGt > 2:447128/1‑188 (MQ=255) ggCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGt < 1:447132/188‑1 (MQ=255) tGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCg > 2:270771/1‑186 (MQ=255) tGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCg < 1:270775/186‑1 (MQ=255) aaaCCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCg < 1:136334/181‑1 (MQ=255) aaaCCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCg > 2:136330/1‑181 (MQ=255) aaaCCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGgc < 1:408645/225‑1 (MQ=255) ctgctgGCGTTGCGCCGGACGGGGGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCg < 1:32421/169‑1 (MQ=255) cGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTgg < 2:195153/174‑1 (MQ=255) ccatgtagaggcccagttcacctgtcgcggcttgcagctgccggtacagcgcgcccaacgtctcgggtaagtcctgtgtatcggccagcagcaccacgaacaggtcgcccggcaactgcgccgtcacactgccgggCGACCTGTTc < 2:122049‑M2/10‑1 (MQ=255) aggcccagttcacctgtcgcggcttgcagctgccggtacagcgcgcccaacgtctcgggtaagtcctgtgtatcggccagcagcaccacgaacaggtcgcccggcaactgcgccgtcacactgccgggCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGgc < 2:171918‑M2/55‑1 (MQ=255) cTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATg < 1:135402/232‑1 (MQ=255) gTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGa > 2:304144/1‑206 (MQ=255) tCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTgg < 2:464340/144‑1 (MQ=255) aGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGgc < 2:173229/173‑1 (MQ=255) gcgcCCGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGtgct < 1:63020/122‑1 (MQ=255) gcgcACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTg < 1:488920/236‑1 (MQ=255) gcACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTg < 2:427206/196‑1 (MQ=255) gCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTCCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGa < 1:244762/180‑1 (MQ=255) cGTACCTGGCAGGCCCCCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGaa < 1:39933/183‑1 (MQ=255) ggCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTg > 2:438690/1‑179 (MQ=255) ggCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTg < 1:438694/179‑1 (MQ=255) gcccaacgtctcgggtaagtcctgtgtatcggccagcagcaccacgaacaggtcgCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCct < 2:171918‑M1/128‑1 (MQ=255) cccaacgtctcgggtaagtcctgtgtatcggccagcagcaccacgaacaggtcgCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTAccc < 2:333372‑M1/72‑1 (MQ=255) cccGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGAc > 1:61673/1‑203 (MQ=255) gggtaagtcctgtgtatcggccagcagcaccacgaacaggtcgcccggcaactgcgccgtcacactgccgggCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTggg < 2:333372‑M2/54‑1 (MQ=255) ccTGGAAGATCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTggg < 1:107604/162‑1 (MQ=255) cTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGa < 2:177898/230‑1 (MQ=255) cTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGa > 1:177902/1‑230 (MQ=255) tGGTGCCGCCAGCGGCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTGCGTGGTGCTGCTGGCCGATACGCAg < 2:59897/78‑1 (MQ=255) gaacaggtcgCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATgg < 2:122049‑M1/136‑1 (MQ=255) gccAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTc < 2:242805/158‑1 (MQ=255) cggcgcCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGGCGTGCCTCgtt < 1:73270/157‑3 (MQ=255) cAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGAtgtg < 1:475664/216‑1 (MQ=255) CGGCAGTGTGACGGCGCAGCTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTg > 2:367031‑M1/1‑121 (MQ=255) tgACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGATGTGGCGCAGCATCTGCGCCCGGCCAACGGCTAt > 1:495141/1‑230 (MQ=255) gACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGATGTGGCGCAGCATCTGCGCCCGGCCAACGGCTATTGc > 2:186898/1‑232 (MQ=255) cGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTg > 2:155470/1‑191 (MQ=255) gcgcAGTTGCCGGGCGACATGTTCGTGGTGCTGCTGGCCGATACAACGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGATGTgg < 2:468823/196‑1 (MQ=255) gcAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCctct < 2:154599/113‑1 (MQ=255) ccgggCGACCTGTTCGGGGGGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGATGTGGCGCAGCATCTGCGCCCGGCCAACGGCTATTGCAACTTc < 2:193713‑M2/220‑1 (MQ=255) | ACCCGAGCCTGGCAATTGCCCGGCAACGGGCAGCACACCTGCAACTGGCGCTGGATAAACCGCGGCGCCTGCTGGCGTTGCGCCTGACGGGCGTGAACGCCTTGTTCGAGCGCCAAGGGCTGGCGCACGGCGAGCGTACCTGGCAAGCCACCCGCCAGGCCCTGGAAGACCAGCTCGAAGCCTGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGCTGGATGTGGCGCAGCATCTGCGCCCGGCCAACGGCTATTGCAACTTC > AE015451/3617373‑3617818 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |