New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	94636 =	57 (0.990)	6 (0.110)	6/324	NT	9.8%	coding (450/489 nt)	PP_0085	conserved protein of unknown function
	?	AE015451	94723 =	57 (1.040)					coding (363/489 nt)	PP_0085	conserved protein of unknown function

AGCGGAGATCGAGAGCCTTCTGAAAAGCTTGGAAAACCTCAAGCATGATGCGTCGGAAGAGTCCCAGAAGTCGGTGAAGGCAATCCGCAGCAACGCTGAAAGCGCACTGCGTCATTCGCGCAGCCTACTGAGCGATGCGTACGAGGAAGTGAAGCAGCGCACCCGCCAGACCGGCAAAGCCACCCGGGACTACGCCCAGGAACACCCCTACACCACCGCCGGTGTGGCCATTGGTGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/94876‑94636 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgctgCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCAGTGCGCTTTCAGCGTTGCTGCGGATTGCCTTCACCGACTTCTGGGACTCTTCCGACGCATCATGCTTGAGGTTTTCCAAGCTTTTCAGAAGGCTCTCGATCTCCGCTTCCATGCTTTCCAGGGACGTTTTACGCAGCGAGTTGCGGTGCATGTTGACTCTCCTTTGCAGTATGGGCTGTAAGGAT  >  AE015451/94723‑94954                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCGGAGATCGAGAGCCTTCTGAAAAGCTTGGAAAACCTCAAGCATGATGCGTCGGAAGAGTCCCAGAAGTCGGTGAAGGCAATCCGCAGCAACGCTGAAAGCGCACTGCGTCATTCGCGCAGCCTACTGAGCGATGCGTACGAGGAAGTGAAGCAGCGCACCCGCCAGACCGGCAAAGCCACCCGGGACTACGCCCAGGAACTCCCCTACACCACCGCCGGTGTGGCCATTGGTG                                                                                                                                                                                                                                               <  1:708347/236‑1        ATCGAGAGCCTTCTGAAAAGCTTGGAAAACCTCAAGCATGATGCGTCGGAAGAGTCCCAGAAGTCGGTGAAGGCAATCCGCAGCAACGCTGAAAGCGCACTGCGTCATTCGCGCAGCCTACTGAGCGATGCGTACGAGGAAGTGAAGCAGCGCACCCGCCAGACCGGCAAAGCCACCCGGGACTACGCCCAGGAACACCCCTACACCACCGCCGGTGTGGCCATTGGTGCGCT                                                                                                                                                                                                                                           >  2:640222/1‑233                 CTTCTGAAAAGCTTGGAAAACCTCAAGCATGATGCGTCGGAAGAGTCCCAGAAGTCGGTGAAGGCAATCCGCAGCAACGCTGAAAGCGCACTGCGTCATTCGCGCAGCCTACTGAGCGATGCGTACGAGGAAGTGAAGCAGCGCACCCGCCAGACCGGCAAAGCCACCCGGGACTACGCCCAGGAACACCCCTACACCACCGCCGGTGTGGCCATTGGTGCGCTGCTTCACTTCCT                                                                                                                                                                                                                               <  1:640225/236‑1                                                                         gggGAAGGCCATCCGCAGCAACGCTGAAAGCGCACTGCGTCATTCGCGCAGCCTACTGAGCGATGCGTACGAGGAAGTGAAGCAGCGCACCCGCCAGACCGGCAAAGCCACCCGGGACTACGCCCAGGAACACCCCTACACCACCGCCGGTGTGGCCATTGGTGCGCTGCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCA                                                                                                                                                                                           <  1:27742/213‑1                                                                                                                                                                               CAAAGCCACCCGGGACTACGCCCAGGAACACCCCTACACCACCGCCGGTGTGGCCATTGGTGCGCTGCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCAGTGCGCTTTCAGCGTTGCTGCGGATTGCCTTCACCGACTTCTGGGACTCTTCCGACGCATCATGCTTGAGGTTTT                                                                                                                <  1:875956/189‑1                                                                                                                                                                                    CCACCCGGGACGACGCCCAGGAACACCCCTCCACCACCGCCGGTGTGGCCATTGGTGCGCTGCTTCACTTACTCGTAC                                                                                                                                                                                                                          <  2:25744/78‑1                                                                                                                                                                                                    CCAGGAACACCCCTACACCACCGCCGGTGTGGCCATTGGTGCGCTGCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCAGTGCGCTTTCAGCGTTGCTGCGGATTGCCTTCACCGACTTCTGGGACTCTTCCGACGCATCATGCTTGAGGTTTTCCAAGCTTTTCAGAAGGCTCTCGATCTCCGCTTCCATGCTTTCCAGGGACGTTTTACGCAGCGAGTT                                             >  1:708959/1‑235                                                                                                                                                                                                                     CCACCGCCGGTGTGGCCATTGGTGCGCTGCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCAGTGCGCTTTCAGCGTTGCTGCGGATTGCCTTCACCGACTTCTGGGACTCTTCCGACGCATCATGCTTGAGGTTTTCCAAGCTTTTCAGAAGGCTCTCGATCTCCGCTTCCATGCTTTCCAGGGACGTTTTACGCAGCGAGTTGCGGTGCATGTTGACTCT                           >  1:1022747/1‑236                                                                                                                                                                                                                                            GCGCTGCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCAGTGCGCTTTCAGCGTTGCTGCGGATTGCCTTCACCGACTTCTGGGACTCTTCCGACGCATCATGCTTGAGGTTTTCCAAGCTTTTCAGAAGGCTCTCGATCTCCGCTTCCATGCTTTCCAGGGACGTTTTACGCAGCGAGTTGCGGTGCATGTTG                                <  2:522920/208‑1                                                                                                                                                                                                                                               CTGCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCAGTGCGCTTTCAGCGTTGCTGCGGATTGCCTTCACCGACTTCTGGGACTCTTCCGACGCATCATGCTTGAGGTTTTCCAAGCTTTTCAGAAGGCTCTCGATCTCCGCTTCCATGCTTTCCAGGGACGTTTTACGCAGCGAGTTGCGGTGCATGTTGACTCTCCTTTGCAGTATGGGCTGTAAGGAT  <  1:1061720/235‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCGGAGATCGAGAGCCTTCTGAAAAGCTTGGAAAACCTCAAGCATGATGCGTCGGAAGAGTCCCAGAAGTCGGTGAAGGCAATCCGCAGCAACGCTGAAAGCGCACTGCGTCATTCGCGCAGCCTACTGAGCGATGCGTACGAGGAAGTGAAGCAGCGCACCCGCCAGACCGGCAAAGCCACCCGGGACTACGCCCAGGAACACCCCTACACCACCGCCGGTGTGGCCATTGGTGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/94876‑94636 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgctgCTTCACTTCCTCGTACGCATCGCTCAGTAGGCTGCGCGAATGACGCAGTGCGCTTTCAGCGTTGCTGCGGATTGCCTTCACCGACTTCTGGGACTCTTCCGACGCATCATGCTTGAGGTTTTCCAAGCTTTTCAGAAGGCTCTCGATCTCCGCTTCCATGCTTTCCAGGGACGTTTTACGCAGCGAGTTGCGGTGCATGTTGACTCTCCTTTGCAGTATGGGCTGTAAGGAT  >  AE015451/94723‑94954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.