New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 299905	67 (1.160)	4 (0.070)	4/332	NT	5.9%	coding (1221/2586 nt)	yhgF	putative transcriptional accessory protein
	?	AE015451	= 299912	62 (1.110)					coding (1214/2586 nt)	yhgF	putative transcriptional accessory protein

CAACTCGGTCACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/299668‑299905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGATCGCCGTGGTCGACGCAACCGGCAAACTGCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCGCCAAACACTCGGTGGAGCTGATCGCCATTGGCAACGGTACCGCCAGCCGCGAAAGCGACAAGCTGGT  <  AE015451/299912‑299678                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAACTCGGTCACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGC                                                                                                                                                                                                                                               >  1:301251/1‑236 CAACTCGGTCACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGC                                                                                                                                                                                                                                               >  1:959637/1‑236 CAACTCGGTCACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGG                                                                                                                                                                                                                                                >  1:852486/1‑235 CAACTCGGTCACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGGCGAAGCCCAGGGGGGCGCGGGGGC                                                                                                                                                                                                                                               >  1:97020/1‑236                                                                                                                                                                                                         GCAGGCCCGGGTCGAAGCCCAGGGCGGCGCGGGGCCCGCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACC                                                                                                                                                                                                         >  1:55968/1‑74                                                                                                                                                                                                                   GTCGAAGCCCAGGGTGGCGCGGGGGCCGCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGATCGCCGTGGTCGACGCAACCG                                                                                                                                                            >  1:861589/1‑109                                                                                                                                                                                                                   GTCGAAGCCCAGGGTGGCGCGGGGGCCGCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGATCGCCGTGGTCGACGCAACCG                                                                                                                                                            <  2:861586/109‑1                                                                                                                                                                                                                          CCCAGGGTGGCGCGGGGGCCGCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGATCGCCGTGGTCGACGCAACCGGCAAACTGCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCGCCAAACACTC                                                           >  1:193520/1‑199                                                                                                                                                                                                                                              GCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGATCGCCGTGGTCGACGCAACCGGCAAACTGCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCGCCAAACACTCG                                                          >  2:1080995/1‑180                                                                                                                                                                                                                                              GCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGAGCGCCGTGGTCGACGCAACCGGCAACCTGCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGCCTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCGCCAAACACTCGGTGGAGCTGATCGCCATTGGCAACGGTACCGCCAGCCGCGAAAGCGACAAGCTGGT  <  1:586067/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAACTCGGTCACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/299668‑299905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgCCCCGGCCGGCCCCCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGATCGCCGTGGTCGACGCAACCGGCAAACTGCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCGCCAAACACTCGGTGGAGCTGATCGCCATTGGCAACGGTACCGCCAGCCGCGAAAGCGACAAGCTGGT  <  AE015451/299912‑299678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.