New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 29990567 (1.160)4 (0.070) 4/332 NT 5.9% coding (1221/2586 nt) yhgF putative transcriptional accessory protein
?AE015451 = 299912 62 (1.110)coding (1214/2586 nt) yhgF putative transcriptional accessory protein

ACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGTGGTTGCCGATCATCA  >  AE015451/299678‑300110
                                                                                                                                                                                                                                          |                                                                                                                                                                                                      
aCCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGGCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGGTTGCCGGTTGCGTCGACCACGGCGCTCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGc                                                                                                                                                                                                       <  1:586067‑M2/236‑2 (MQ=255)
      ttGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCca                                                                                                                                                                                                  >  1:705009/1‑235 (MQ=255)
           gCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCcagcagca                                                                                                                                                                                            >  1:493160/1‑236 (MQ=255)
                       ggCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAgg                                                                                                                                                                                 <  1:862935/235‑1 (MQ=255)
                                                        cGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGc                                                                                                                                                                                                       >  2:1080995‑M2/1‑179 (MQ=255)
                                                         gAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGcggcccccgcgccaccctggg                                                                                                                                                                                   >  1:193520‑M2/1‑178 (MQ=255)
                                                                     cacaGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTc                                                                                                                                                                                        <  1:982722/182‑1 (MQ=255)
                                                                           gCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGcc                                                                                                                            >  1:266153/1‑236 (MQ=255)
                                                                               ccATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACAtt                                                                                                                                                                >  2:835527/1‑196 (MQ=255)
                                                                                cATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACa                                                                                                                       <  1:1003943/236‑1 (MQ=255)
                                                                                     tgGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCg                                                                                                                  >  1:920900/1‑236 (MQ=255)
                                                                                       gAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGAtcgcctcg                                                                                                                                                      >  1:49835/1‑198 (MQ=255)
                                                                                       gAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTc                                                                                                                   >  2:698429/1‑233 (MQ=255)
                                                                                       gAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGt                                                                                                                >  1:1007697/1‑236 (MQ=255)
                                                                                           tGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCcagcag                                                                                                                                                                                              <  2:1087822/154‑1 (MQ=255)
                                                                                                cGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGAtcgc                                                                                                                                                          <  2:537186/185‑1 (MQ=255)
                                                                                                 gatCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCcagca                                                                                                                                                                                               >  2:667109/3‑147 (MQ=255)
                                                                                                   tCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAggtgggt                                                                                                    >  1:769094/1‑236 (MQ=255)
                                                                                                    cccAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGGCATGCAgg                                                                                                                                                                                 >  2:179549/1‑158 (MQ=255)
                                                                                                     ccAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCg                                                                                                                  >  1:51626/1‑220 (MQ=255)
                                                                                                     ccAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGGCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCt                                                                                                                                >  1:115961/1‑206 (MQ=255)
                                                                                                      cAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCcagc                                                                                                                                                                                                <  2:924615/141‑1 (MQ=255)
                                                                                                      cAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCcagc                                                                                                                                                                                                >  1:924618/1‑141 (MQ=255)
                                                                                                          cGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCTGGTTGTGGGCGa                                                                                                                                                                       >  1:875837/1‑162 (MQ=255)
                                                                                                             tcttcGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCtt                                                                                           <  1:698432/235‑1 (MQ=255)
                                                                                                               ttcGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCtt                                                                                           <  2:959634/233‑1 (MQ=255)
                                                                                                                tcGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTAc                                                                                                >  2:467281/1‑227 (MQ=255)
                                                                                                                         gCGGGTAGACCGTGGTGTGGTCCAGCCGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCcag                                                                                                                                                                                                 <  2:882019/121‑1 (MQ=255)
                                                                                                                           gggTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGTTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGTCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGttt                                                                                                              <  2:1005366/202‑1 (MQ=255)
                                                                                                                            ggTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCa                                                                            <  1:532665/235‑1 (MQ=255)
                                                                                                                            ggTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCa                                                                            <  1:902786/235‑1 (MQ=255)
                                                                                                                             gTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCa                                                                            <  2:1007694/234‑1 (MQ=255)
                                                                                                                                        tgtggtCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGAtc                                                                                                                                                            >  1:1067430/1‑143 (MQ=255)
                                                                                                                                        tgtggtCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGAtc                                                                                                                                                            <  2:1067427/143‑1 (MQ=255)
                                                                                                                                         gtggtCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCAc                                                              >  1:314417/1‑236 (MQ=255)
                                                                                                                                            gtCCAGCAGTTTGCCGGTTGCGTCGCCCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCa                                                                                                           <  1:785820/188‑1 (MQ=255)
                                                                                                                                               cagcagTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCa                                                                                                           >  2:410723/1‑185 (MQ=255)
                                                                                                                                                  cagTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCa                                                                                                           >  2:413210/1‑182 (MQ=255)
                                                                                                                                                  cagTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCa                                                                                                           <  1:413213/182‑1 (MQ=255)
                                                                                                                                                     tttGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGaa                                                                                                                         >  1:925772/1‑165 (MQ=255)
                                                                                                                                                     tttGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCAc                                                      >  2:644203/1‑232 (MQ=255)
                                                                                                                                                     tttGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGt                                                  >  1:140585/1‑236 (MQ=255)
                                                                                                                                                         ccGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCa                                                                            <  1:951460/206‑1 (MQ=255)
                                                                                                                                                         ccGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGGCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACa                                                                                                                       <  1:829478/163‑1 (MQ=255)
                                                                                                                                                          cGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGcggcccccgcgccaccctgggcttcgac                                                                                                                                                                            <  2:861586‑M2/109‑29 (MQ=255)
                                                                                                                                                          cGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGcggcccccgcgccaccctgggcttcgac                                                                                                                                                                            >  1:861589‑M2/1‑81 (MQ=255)
                                                                                                                                                          cGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGAtcg                                                                                                                                                           <  1:18403/126‑1 (MQ=255)
                                                                                                                                                          cGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGAtcg                                                                                                                                                           >  2:18403/1‑126 (MQ=255)
                                                                                                                                                          cGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTAc                                                                                                >  2:1088024/1‑185 (MQ=255)
                                                                                                                                                          cGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTcggcc                                             >  1:869940‑M2/1‑231 (MQ=255)
                                                                                                                                                          cGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTcggc                                              <  1:1040271‑M2/235‑5 (MQ=255)
                                                                                                                                                             ttGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAAGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCTCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAg                                                                                 <  2:1026580/197‑1 (MQ=255)
                                                                                                                                                                  tCGACCACGGCGATCGTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGGGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCa                                                                            <  1:287027/197‑1 (MQ=255)
                                                                                                                                                                        aCGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTcgc                                                                                                                                      <  2:791145/133‑1 (MQ=255)
                                                                                                                                                                             gATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGcacc                                                                     >  1:829210/1‑193 (MQ=255)
                                                                                                                                                                                cTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCcagcagca                                                                                                                                                                                            <  2:118859/71‑1 (MQ=255)
                                                                                                                                                                                  tGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGCGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGtt                                                                                                                                                                               >  2:198455/1‑82 (MQ=255)
                                                                                                                                                                                   gCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCa                                                                                                           <  2:340680/149‑1 (MQ=255)
                                                                                                                                                                                       ccGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAg                                                                                 <  2:266150/171‑1 (MQ=255)
                                                                                                                                                                                         ggTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGt                 >  2:770272/1‑233 (MQ=255)
                                                                                                                                                                                             cgcAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGCGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGgcggcg                                  >  1:301003/1‑212 (MQ=255)
                                                                                                                                                                                              gcAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGCACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCCGCTCg                                                                                                                              >  2:879871/1‑119 (MQ=255)
                                                                                                                                                                                              gcAGGCCCGGGTCGAAGCCCAGGGGGGCGCGGGGGCCGGCCGGGGCGGCCCGCAGCAGGTCATGCCGGTTGTGGGCGAACACATTg                                                                                                                                                               >  2:239969/1‑86 (MQ=255)
                                                                                                                                                                                               cAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACa                                                                                                                       <  2:254661/125‑1 (MQ=255)
                                                                                                                                                                                               cAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGTgg               <  1:236633/229‑1 (MQ=255)
                                                                                                                                                                                                 ggCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGTGGTTGCCGat       <  1:446873/235‑1 (MQ=255)
                                                                                                                                                                                                    gggggTGGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAg                                                                                              <  2:170662/143‑1 (MQ=255)
                                                                                                                                                                                                       ggTCGAAGGCCAGGGTGGCGGGGGGGCCGGCCGGGGCGGCCAGGAGCAGGTCATGCACGTTGTGGGCGAACTCATTGATCGCCTCGCCTTCGGCGCTGTCGCGCAGCTCGCCGAACTGGTc                                                                                                                   <  2:831826/121‑1 (MQ=255)
                                                                                                                                                                                                       ggTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGcgggccccgcgccgccctgggcttcgacccgggcctgc                                                                                                                                                                  >  1:55968‑M2/1‑36 (MQ=255)
                                                                                                                                                                                                          cGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGt                                >  2:618398/1‑201 (MQ=255)
                                                                                                                                                                                                          cGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGcc                      >  1:23699/1‑211 (MQ=255)
                                                                                                                                                                                                               cccGGGGTGGCGCGGGGGCCGTCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGTGGTTGCCGAtcatca  <  2:301248/226‑1 (MQ=255)
                                                                                                                                                                                                               cccAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCCCCCCGCCACt                                                     >  2:89210/1‑175 (MQ=255)
                                                                                                                                                                                                               cccAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGTGGt              >  1:131873/1‑214 (MQ=255)
                                                                                                                                                                                                                  aGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAgc                                                                          <  2:887374/151‑1 (MQ=255)
                                                                                                                                                                                                                               ggccggccGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGTGGTTGCCGat       <  2:824280/205‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                      
ACCAGCTTGTCGCTTTCGCGGCTGGCGGTACCGTTGCCAATGGCGATCAGCTCCACCGAGTGTTTGGCGCACAGTGCGGCCATGATGGAAATGGTGCGGTCCCAGTCGTTCTTCGGCGCGTGCGGGTAGACCGTGGTGTGGTCCAGCAGTTTGCCGGTTGCGTCGACCACGGCGATCTTGCAGCCGGTGCGCAGGCCCGGGTCGAAGCCCAGGGTGGCGCGGGGGCCGGCCGGGGCGGCCAGCAGCAGGTCATGCAGGTTGTGGGCGAACACATTGATCGCCTCGCCTTCGGCACTGTCGCGCAGCTCGCCGAACAGGTCGGTTTCCAGGTGGGTGTACAGCTTGACCTTCCAGGTCCAGCGCACCACTTCACCCAGCCACTTGTCGGCCGGCCGGCTGCGGTTCTCGATGCCGACGTGGTTGCCGATCATCA  >  AE015451/299678‑300110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.