| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 400798 = | 43 (0.750) | 4 (0.070) | 4/326 | NT | 8.7% | coding (384/1059 nt) | PP_0334 | transposase |
| ? | AE015451 | 400827 = | 43 (0.780) | coding (413/1059 nt) | PP_0334 | transposase | |||||
GGCGGTCGCTTCGAGCCGGCGGCTCAGCGCCGTTATGCGTTCACCTAGAGACAACCAGTCCATCAGCAACTCATCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTACCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/401038‑400798‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccgcgcTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGCT > AE015451/400827‑401056 GGCGGTCGCTTCGAGCCGGCGGCTCAGCGCCGTTATGCGTTCACCTAGAGACAACCAGTCCATCAGCAACTCATCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTcc > 1:791949/1‑234 TCGCTTCGAGCCGGCGGCTCAGCGCCGTTATGCGTTCACCTAGAGACAACCAGTCCATCAGCAACTCATCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTACCG > 1:294743/1‑233 CCGGCGGCTCAGCGCCGTTATGCGTTCACCTAGAGACAACCAGTCCATCAGCAACTCATCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTAC < 1:172935/221‑1 CAGTCCATCAGCAACTCATCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTT > 1:1075255/1‑179 CAGTCCATCAGCAACTCATCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTT < 2:1075252/179‑1 cCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATC < 1:287841/235‑1 CTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCC < 1:941662/186‑1 GGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTACCGCGCTGGGTAATCAGATCCGTGGTT < 1:720435/112‑1 GGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTACCGCGCTGGGTAATCAGATCCGTGGTT > 2:720432/1‑112 CCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGC > 1:913951/1‑235 CCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGG > 2:921886/1‑164 CGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGCT < 2:911040/233‑1 CTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTA > 1:1009683/1‑168 CTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTA < 2:1009680/168‑1 GGCGGTCGCTTCGAGCCGGCGGCTCAGCGCCGTTATGCGTTCACCTAGAGACAACCAGTCCATCAGCAACTCATCGAGCAACTCGCGCAACAGGTCGGGTAGAGGCAAGGAAGCATCCTCAAGCGCCTGAGGCACATGCTTATTGATCGCGGCATCGCCCTGGGGCATGGATACGCCATGCTCAAGTAGCAAACCACGGATCTGATTACCCAGCGCGGTATGTCGCTTGATGTTACCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/401038‑400798‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccgcgcTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGCT > AE015451/400827‑401056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |