New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	400798 =	43 (0.750)	4 (0.070)	4/326	NT	8.7%	coding (384/1059 nt)	PP_0334	transposase
	?	AE015451	400827 =	43 (0.780)					coding (413/1059 nt)	PP_0334	transposase

GTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTCGCCGAACATCGCAGCGGTGCAAAGAACGATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGG  >  AE015451/400568‑401023                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                  agcgactttatcctcttgggcggtcgcttcgagccggcggctcagcgccgttatgcgttcacctagagacaaccagtccatcagcaactcatcgagcaactcgcgcaacaggtcgggtagaggcaaggaagcatcctcaagcgcctgaggcacatgcttattgatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccagcg                                                                                                                                                                                                                                 <  2:911040‑M1/3‑1 (MQ=255)  gcgactttatcctcttgggcggtcgcttcgagccggcggctcagcgccgttatgcgttcacctagagacaaccagtccatcagcaactcatcgagcaactcgcgcaacaggtcgggtagaggcaaggaagcatcctcaagcgcctgaggcacatgcttattgatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccaGCGCgg                                                                                                                                                                                                                              >  1:913951‑M1/230‑235 (MQ=255)                                                                tagagacaaccagtccatcagcaactcatcgagcaactcgcgcaacaggtcgggtagaggcaaggaagcatcctcaagcgcctgaggcacatgcttattgatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccag                                                                                                                                                                                                                                   >  1:1009683‑M1/168‑168 (MQ=255)                                                                tagagacaaccagtccatcagcaactcatcgagcaactcgcgcaacaggtcgggtagaggcaaggaagcatcctcaagcgcctgaggcacatgcttattgatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccag                                                                                                                                                                                                                                   <  2:1009680‑M1/1‑1 (MQ=255)                                                                         ccagtccatcagcaactcatcgagcaactcgcgcaacaggtcgggtagaggcaaggaagcatcctcaagcgcctgaggcacatgcttattgatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccaGCGCgg                                                                                                                                                                                                                              >  2:921886‑M1/159‑164 (MQ=255)                                                                                                                         gATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGa                                                                                                      >  1:787867/1‑236 (MQ=31)                                                                                                                                    cTGCTATGCCATTTTGCGTGCCGGTCTCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCt                                                                                              <  2:1033634/233‑1 (MQ=14)                                                                                                                                        tATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCctc                                                                                        >  1:822627/1‑235 (MQ=31)                                                                                                                                         aTGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCtt                                                                                                 <  2:540093/225‑1 (MQ=31)                                                                                                                                          tGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTAc                                                                                     >  1:267185/1‑236 (MQ=31)                                                                                                                                            ccATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAg                                                                                                                 <  1:392637/206‑1 (MQ=11)                                                                                                                                                    cGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGa                                                                                 <  1:145191/230‑1 (MQ=31)                                                                                                                                                         cGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTCTTgc                                                                         >  2:779403/1‑233 (MQ=14)                                                                                                                                                            tCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGa                                                                     >  1:714332/1‑234 (MQ=31)                                                                                                                                                                   gatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTcgg                                                            <  1:287841‑M1/168‑2 (MQ=255)                                                                                                                                                                      aGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATg                                                          <  1:837836/235‑1 (MQ=31)                                                                                                                                                                        cATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGa                                                                                                      <  2:88673/189‑1 (MQ=31)                                                                                                                                                                         ggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAg                                                                                                        <  1:941662‑M1/124‑1 (MQ=255)                                                                                                                                                                             cTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATTCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGa                                                                                                      >  2:814954/1‑184 (MQ=14)                                                                                                                                                                               tCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGCGTTGCCCgg                                                            >  2:148988/1‑223 (MQ=14)                                                                                                                                                                                  ctACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCctc                                                                                        <  2:113959/192‑1 (MQ=14)                                                                                                                                                                                   tACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                            <  1:899547/236‑1 (MQ=31)                                                                                                                                                                                   tACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                            <  1:409620/236‑1 (MQ=31)                                                                                                                                                                                          cAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTg                                          <  1:350347/231‑1 (MQ=31)                                                                                                                                                                                           aaGAGCGCCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGAGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCAATTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTAcc                                                                                    >  2:860904/1‑188 (MQ=9)                                                                                                                                                                                           aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGa                                                                     >  2:178157/1‑203 (MQ=31)                                                                                                                                                                                           aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                            >  1:102043/1‑228 (MQ=31)                                                                                                                                                                                           aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                            <  2:102041/228‑1 (MQ=31)                                                                                                                                                                                           aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTg                                      >  2:840447/1‑234 (MQ=31)                                                                                                                                                                                           aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGt                                     >  1:956636/1‑235 (MQ=31)                                                                                                                                                                                           aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAAGCGCTTGAGGATGCt                                                                                                  >  1:313894/1‑174 (MQ=14)                                                                                                                                                                                                caccacAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCGGTTGCGCGAGTTGCTCGATGAGTTGCTGa                                                 >  1:426166/1‑218 (MQ=14)                                                                                                                                                                                                  ccacAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTa                                <  2:361857/233‑1 (MQ=31)                                                                                                                                                                                                   cacaGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAgg                              <  2:489154/234‑1 (MQ=31)                                                                                                                                                                                                        cACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGc                       >  1:768844/1‑236 (MQ=31)                                                                                                                                                                                                              cTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATaa                   >  1:300578/1‑234 (MQ=31)                                                                                                                                                                                                              cTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACg                 <  1:859348/236‑1 (MQ=31)                                                                                                                                                                                                                aTTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGTGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGACGCCGCGATCAATAAGCATGTGCCTCAg                                                                                                                 >  2:1085890/1‑138 (MQ=14)                                                                                                                                                                                                                aTTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACgg                >  2:1001070/1‑235 (MQ=31)                                                                                                                                                                                                                aTTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTGCCTTGc                                                                                           >  2:46495/1‑160 (MQ=14)                                                                                                                                                                                                                  aaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGcc                                                                                                                                         >  2:720432‑M1/22‑112 (MQ=255)                                                                                                                                                                                                                  aaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGcc                                                                                                                                         <  1:720435‑M1/91‑1 (MQ=255)                                                                                                                                                                                                                    aaGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGgcgc             <  2:1031340/234‑1 (MQ=31)                                                                                                                                                                                                                     aGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGtt                                                                  >  1:168596/1‑180 (MQ=31)                                                                                                                                                                                                                     aGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGgc               >  1:785606/1‑231 (MQ=31)                                                                                                                                                                                                                      gcgcTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAg         <  1:840450/236‑1 (MQ=31)                                                                                                                                                                                                                       cgcTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAg         <  1:861666/235‑1 (MQ=31)                                                                                                                                                                                                                            cACCGTATCCGTCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGtt                                                                  <  2:740116/173‑1 (MQ=14)                                                                                                                                                                                                                              ccGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAg                                                                    >  2:950111/1‑169 (MQ=32)                                                                                                                                                                                                                              ccGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGaag                         >  1:661317/1‑211 (MQ=14)                                                                                                                                                                                                                              ccGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCgg  >  1:1018664/1‑235 (MQ=31)                                                                                                                                                                                                                               cGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGCGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCGGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTAccc                                                                                   >  2:282751/1‑153 (MQ=14)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                  GTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTCGCCGAACATCGCAGCGGTGCAAAGAACGATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGG  >  AE015451/400568‑401023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.