New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 400798 =43 (0.750)4 (0.070) 4/326 NT 8.7% coding (384/1059 nt) PP_0334 transposase
?AE015451 400827 = 43 (0.780)coding (413/1059 nt) PP_0334 transposase

TCGCCGAACATCGCAGCGGTGCAAAGAACGATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGCTCAGCGG  >  AE015451/400659‑401062
                                                                                                                                                                        |                                                                                                                                                                                                                                           
ccgagcaactcgcgcaacaggtcgggtagaggcaaggaagcatcctcaagcgcctgaggcacatgcttattgatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccagcgcggtatgtcgcttgatgttaccgcgcTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATc                                                                                                                                                                          <  1:287841‑M2/68‑1 (MQ=255)
                             gATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGa                                                                                                                                             >  1:787867/1‑236 (MQ=31)
                                        cTGCTATGCCATTTTGCGTGCCGGTCTCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCt                                                                                                                                     <  2:1033634/233‑1 (MQ=14)
                                            tATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCctc                                                                                                                               >  1:822627/1‑235 (MQ=31)
                                            ctcaagcgcctgaggcacatgcttattgatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccagcgcggtatgtcgcttgatgttaccgcgcTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGcc                                                                                                                                                                                <  1:941662‑M2/62‑1 (MQ=255)
                                             aTGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCtt                                                                                                                                        <  2:540093/225‑1 (MQ=31)
                                              tGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTAc                                                                                                                            >  1:267185/1‑236 (MQ=31)
                                                ccATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAg                                                                                                                                                        <  1:392637/206‑1 (MQ=11)
                                                        cGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGa                                                                                                                        <  1:145191/230‑1 (MQ=31)
                                                             cGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTCTTgc                                                                                                                >  2:779403/1‑233 (MQ=14)
                                                                tCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGa                                                                                                            >  1:714332/1‑234 (MQ=31)
                                                                       gatcgcggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTcgg                                                                                                   <  1:287841‑M1/168‑2 (MQ=255)
                                                                          aGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATg                                                                                                 <  1:837836/235‑1 (MQ=31)
                                                                            cATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGa                                                                                                                                             <  2:88673/189‑1 (MQ=31)
                                                                             ggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccagcgcggtatgtcgcttgatgttaccgcgcTGGGTAATCAGATCCGTGGtt                                                                                                                                                                                                                         >  2:720432‑M2/92‑112 (MQ=255)
                                                                             ggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccagcgcggtatgtcgcttgatgttaccgcgcTGGGTAATCAGATCCGTGGtt                                                                                                                                                                                                                         <  1:720435‑M2/21‑1 (MQ=255)
                                                                             ggcatcgccctggggcatggatacgccatgctcaagtagcaaaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAg                                                                                                                                               <  1:941662‑M1/124‑1 (MQ=255)
                                                                                 cTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATTCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGa                                                                                                                                             >  2:814954/1‑184 (MQ=14)
                                                                                   tCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGCGTTGCCCgg                                                                                                   >  2:148988/1‑223 (MQ=14)
                                                                                      ctACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCctc                                                                                                                               <  2:113959/192‑1 (MQ=14)
                                                                                       tACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                                                                   <  1:409620/236‑1 (MQ=31)
                                                                                       tACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                                                                   <  1:899547/236‑1 (MQ=31)
                                                                                              cAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTg                                                                                 <  1:350347/231‑1 (MQ=31)
                                                                                               aaGAGCGCCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGAGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCAATTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTAcc                                                                                                                           >  2:860904/1‑188 (MQ=9)
                                                                                               aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGa                                                                                                            >  2:178157/1‑203 (MQ=31)
                                                                                               aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                                                                   <  2:102041/228‑1 (MQ=31)
                                                                                               aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGAc                                                                                   >  1:102043/1‑228 (MQ=31)
                                                                                               aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTg                                                                             >  2:840447/1‑234 (MQ=31)
                                                                                               aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGt                                                                            >  1:956636/1‑235 (MQ=31)
                                                                                               aaGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAAGCGCTTGAGGATGCt                                                                                                                                         >  1:313894/1‑174 (MQ=14)
                                                                                                    caccacAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCGGTTGCGCGAGTTGCTCGATGAGTTGCTGa                                                                                        >  1:426166/1‑218 (MQ=14)
                                                                                                      ccacAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTa                                                                       <  2:361857/233‑1 (MQ=31)
                                                                                                       cacaGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAgg                                                                     <  2:489154/234‑1 (MQ=31)
                                                                                                            cACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGc                                                              >  1:768844/1‑236 (MQ=31)
                                                                                                                  cTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATaa                                                          >  1:300578/1‑234 (MQ=31)
                                                                                                                  cTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACg                                                        <  1:859348/236‑1 (MQ=31)
                                                                                                                    aTTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGTGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGACGCCGCGATCAATAAGCATGTGCCTCAg                                                                                                                                                        >  2:1085890/1‑138 (MQ=14)
                                                                                                                    aTTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACgg                                                       >  2:1001070/1‑235 (MQ=31)
                                                                                                                    aTTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTGCCTTGc                                                                                                                                  >  2:46495/1‑160 (MQ=14)
                                                                                                                      aaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGcc                                                                                                                                                                                >  2:720432‑M1/22‑112 (MQ=255)
                                                                                                                      aaccacggatctgattacccaGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGcc                                                                                                                                                                                <  1:720435‑M1/91‑1 (MQ=255)
                                                                                                                        aaGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGgcgc                                                    <  2:1031340/234‑1 (MQ=31)
                                                                                                                         aGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGtt                                                                                                         >  1:168596/1‑180 (MQ=31)
                                                                                                                         aGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGgc                                                      >  1:785606/1‑231 (MQ=31)
                                                                                                                          gcgcTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAg                                                <  1:840450/236‑1 (MQ=31)
                                                                                                                           cgcTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAg                                                <  1:861666/235‑1 (MQ=31)
                                                                                                                                cACCGTATCCGTCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGtt                                                                                                         <  2:740116/173‑1 (MQ=14)
                                                                                                                                  ccGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAg                                                                                                           >  2:950111/1‑169 (MQ=32)
                                                                                                                                  ccGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGaag                                                                >  1:661317/1‑211 (MQ=14)
                                                                                                                                  ccGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCgg                                         >  1:1018664/1‑235 (MQ=31)
                                                                                                                                   cGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGCGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCGGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTAccc                                                                                                                          >  2:282751/1‑153 (MQ=14)
                                                                                                                                              CGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGa                               >  1:294743‑M1/1‑233 (MQ=255)
                                                                                                                                                ggAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGcc                          >  1:791949‑M1/3‑236 (MQ=255)
                                                                                                                                                GTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCgg                                         <  1:172935‑M1/221‑1 (MQ=255)
                                                                                                                                                  AACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTg                                                                                 <  2:1075252‑M1/179‑1 (MQ=255)
                                                                                                                                                  AACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTg                                                                                 >  1:1075255‑M1/1‑179 (MQ=255)
                                                                                                                                                                  ccgcgcTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTgg                                                                                >  2:921886‑M2/7‑164 (MQ=255)
                                                                                                                                                                  ccgcgcTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGc         >  1:913951‑M2/7‑235 (MQ=255)
                                                                                                                                                                     cgcTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGCt        <  2:911040‑M2/230‑1 (MQ=255)
                                                                                                                                                                       cTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTa                                                                       <  2:1009680‑M2/167‑1 (MQ=255)
                                                                                                                                                                       cTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTa                                                                       >  1:1009683‑M2/2‑168 (MQ=255)
                                                                                                                                                                        tGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGCTCAGCgg  >  1:460946/1‑236 (MQ=33)
                                                                                                                                                                        |                                                                                                                                                                                                                                           
TCGCCGAACATCGCAGCGGTGCAAAGAACGATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCAAGCGACATACCGCGCTGGGTAATCAGATCCGTGGTTTGCTACTTGAGCATGGCGTATCCATGCCCCAGGGCGATGCCGCGATCAATAAGCATGTGCCTCAGGCGCTTGAGGATGCTTCCTTGCCTCTACCCGACCTGTTGCGCGAGTTGCTCGATGAGTTGCTGATGGACTGGTTGTCTCTAGGTGAACGCATAACGGCGCTGAGCCGCCGGCTCGAAGCGACCGCCCAAGAGGATAAAGTCGCTCAGCGG  >  AE015451/400659‑401062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.