New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	734319 =	27 (0.470)	7 (0.130)	6/320	NT	22.1%	coding (998/1296 nt)	ndh	NADH dehydrogenase
	?	AE015451	734381 =	24 (0.440)					coding (936/1296 nt)	ndh	NADH dehydrogenase

GAAGGTGTGGGCAGCCGGTATCCGCGCGCCAGGTTTCCTCAAGGACATCGATGGCCTGGAAACCAACCGCATCAACCAGCTGGTCGTGCGCCCTACCCTGCAAACCACCCGCGACGACAACATCTTCGCCTTCGGTGACTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/734519‑734319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcggcgcaGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGGGCGCACGACCAGCTGGTTGATGCGGTTGGTTTCCAGGCCATCGATGTCCTTGAGGAAACCTGGCGCGCGGATACCGGCTGCCCACACCTTCAGGCTGGCCTGGATCACTTCACCGTCCTTGGTTTTCAGGCCGTCCTCGGTCACTTCACTGACTGCGGCGTTGGTCATCACCTTCACCCCGA  >  AE015451/734381‑734610                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAAGGTGTGGGCAGCCGGTATCCGCGCGCCAGGTTTCCTCAAGGACATCGATGGCCTGGAAACCAACCGCATCAACCAGCTGGTCGTGCGCCCTACCCTGCAAACCACCCGCGACGACAACATCTTCGCCTTCGGTGACTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCAGTCACCGAAGGCGAAGATGTTG                                                                                                                                                                                                                  >  1:76445/1‑223                 GGTATCCGCGCGCCAGGTTTCCTCAAGGACATCGATGGCCTGGAAACCAACCGCATCAACCAGCTGGTCGTGCGCCCTACCCTGCAAACCACCCGCGACGACAACATCTTCGCCTTCGGTGACTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGT                                                                                                                                                                                                       <  2:76443/218‑1                                                           GAAACCAACCGCATCAACCAGCTGGTCGTGCGCCCTACCCTGCAAACGACCCGCGACGACAACATCTTCGCCTTCGGTGACTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCAGTCACCGAAG                                                                                                                                                                                                                              <  1:1031522/153‑1                                                                                                                                      GGTCACTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCG                                                                                                                                                                                                          <  2:560294/98‑1                                                                                                                                                              CCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGGGCGCACGACCAGCTGGTTGATGCGGTTGGTTTCCAGGCCATCGATGTCCTTGAGGAAACCTGGCGCGCGGATACCGGCTGCCCACACCTTCAGGCTGGCCT                                                                                   >  1:81266/1‑193                                                                                                                                                              CCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGGGCGCACGACCAGCTGGTTGATGCGGTTGGTTTCCAGGCCATCGATGTCCTTGAGGAAACCTGGCGCGCGGATACCGGCTGCCCACACCTTCAGGCTGGCCT                                                                                   <  2:81264/193‑1                                                                                                                                                                  GCAGCGGTCGTAACGTGCCGCCGCGCGCACAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGT                                                                                                                                                                                                       <  2:308682/73‑1                                                                                                                                                                                                     GCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGGGCGCACGACCAGCTGGTTGATGCGGTTGGTTTCCAGGCCATCGATGTCCTTGAGGAAACCTGGCGCGCGGATACCGGCTGCCCACACCTTCAGGCTGGCCTGGATCACTTCACCGTCCTTGGTTTTCAGGCCGTCCTCGGTCACTTCACTGACTGCGGCGTTGGTCATCACCTTCACCCCGA  >  1:309572/1‑235                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAAGGTGTGGGCAGCCGGTATCCGCGCGCCAGGTTTCCTCAAGGACATCGATGGCCTGGAAACCAACCGCATCAACCAGCTGGTCGTGCGCCCTACCCTGCAAACCACCCGCGACGACAACATCTTCGCCTTCGGTGACTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/734519‑734319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcggcgcaGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGGGCGCACGACCAGCTGGTTGATGCGGTTGGTTTCCAGGCCATCGATGTCCTTGAGGAAACCTGGCGCGCGGATACCGGCTGCCCACACCTTCAGGCTGGCCTGGATCACTTCACCGTCCTTGGTTTTCAGGCCGTCCTCGGTCACTTCACTGACTGCGGCGTTGGTCATCACCTTCACCCCGA  >  AE015451/734381‑734610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.