| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 872677 = | 57 (0.990) | 3 (0.050) | 3/326 | NT | 5.9% | coding (485/1272 nt) | PP_0756 | conserved protein of unknown function |
| ? | AE015451 | 872768 = | 42 (0.760) | coding (394/1272 nt) | PP_0756 | conserved protein of unknown function | |||||
CAGGACAAAGTCGAGTACTACGTCGACCAGACCATCGATCGCGCCACCGACGGCGTCACCTACTCGGGTGTGGAACAGCTCAAGGCCGGCACCGCCTACCTGTTCCTGGCCAACCACCGTGACATCGTCATGGACCCGGCCTTCGTCAACTATGCGGTGTACCACGCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/872849‑872677‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcctTGAGCTGTTCCACACCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGATGGTCTGGTCGACGTAGTACTCGACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGC > AE015451/872768‑872999 CAGGACAAAGTCGAGTACTACGTCGACCAGACCATCGATCGCGCCACCGACGGCGTCACCTACTCGGGTGTGGAACAGCTCAAGGCCGGCACCGCCTACCTGTTCCTGGCCAACCACCGTGACATCGTCATGGACCCGGCCTTCGTCAACTATGCGGTGTACCACGCCGGCC < 1:839295/172‑1CAGGACAAAGTCGAGTACTACGTCGACCAGACCATCGATCGCGCCACCGACGGCGTCACCTACTCGGGTGTGGAACAGCTCAAGGCCGGCACCGCCTACCTGTTCCTGGCCAACCACCGTGACATCGTCATGGACCCGGCCTTCGTCAACTATGCGGTGTACCACGCCGGCC > 2:839292/1‑172 TCGCGCCACCGACGGCGTCACCTACTCGGGTGTGGAACAGCTCAAGGCCGGCACCGCCTACCTGTTCCTGGCCAACCACCGTGACATCGTCATGGACCCGGCCTTCGTCAACTATGCGGTGTACCACGCCGGCCTTGAGCTGTTCCACACCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGATGGTCT < 1:797726/189‑1 AGCTCAAGGCCGGCACCGCCTACCTGTTCCTGGCCAACCACCGTGACATCGTCATGGACCCGGCCTTCGTCAACTATGCGGTGTACCACGCCGGCCTTGAGCTGTTCCACACCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGATGGTCTGGTCGAC < 2:455849/158‑1 gccACCACCGTGACATCGTCATGGACCCGGCCTTCGTCAACTATGCGGTGTACCACGCCGGCCTTGAGCTGTTCCACACCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGATGG < 2:830865/112‑1 GGCCTTGAGCTGTTCCGCACCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGATGGTCTGGTCGACGTAGTACTCGACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTG > 1:837152/1‑236 GCCTTGAGCTGTTCCACTCCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGGTGGTCTGGTCGACGTAGTACTCGACTTTGTCCTGCAAGGTCGAG < 2:680289/96‑1 GCCTTGAGCTGTTCCACACCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGATGGTCTGGTCGACGTAGTACTCGACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGC > 1:493544/1‑236 CAGGACAAAGTCGAGTACTACGTCGACCAGACCATCGATCGCGCCACCGACGGCGTCACCTACTCGGGTGTGGAACAGCTCAAGGCCGGCACCGCCTACCTGTTCCTGGCCAACCACCGTGACATCGTCATGGACCCGGCCTTCGTCAACTATGCGGTGTACCACGCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/872849‑872677‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcctTGAGCTGTTCCACACCCGAGTAGGTGACGCCGTCGGTGGCGCGATCGATGGTCTGGTCGACGTAGTACTCGACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGC > AE015451/872768‑872999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |